Gene Slin_2895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2895 
Symbol 
ID8726646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3497919 
End bp3499319 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content51% 
IMG OID 
Productglucose sorbosone dehydrogenase 
Protein accessionYP_003387707 
Protein GI284037777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.997213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAT TTACCATCAG CGCTGCTTTT GCCGCTGTCT TTTTGCTCAG TAGCTTTTTT 
ACTGAACAAA AACCCGCTGC GAAAACGGCC CGTGAGAACT ACGCTACCTA TTGCGCTTCC
TGCCACGGCG AAAAAGTAGA AGCTTTTGTC GACCGCAAAT GGAAACACGG CAACGCCAAG
AGCGACCTTA CCAAAAGTAT TTCGGAAGGT TACCCCGATC TGGGCATGCC AACCTGGAAA
GCCACGCTGA GCGCATCCGA AATCGACGCC CTGGCTGAAC TGATTACGGA AAGCCTGAAA
ACCGTCGACC AGTACAAGTT TACCAGCAAG CCTACCTCAA ATCTATTTGC CTCCGAAGGG
CAAACGGTGA AACTGGACAC AATTGCCAAA GGACTGAATT CAGCCTGGGG GCTGGCGTTC
CTACCCAACG ATGAACTGCT GATTACCGAC CGTTCCGGCG ATATTTACCG GGTCGATAAA
AACCGGCAGA AGGTAAAAGT AACGGGTGGT CCAACGGTGC TGGCAGAAGG CCAGGGTGGT
TTGCTGGATG TAGTCCTGCA CCCGGATTTC GCCAAAAATC AGCTTGTTTA CTTCTCGTAT
TCGGCGGTAA AGAACGAAGG CGACCAGAAA TTATCGACCA CCGCCGTTAT GTGTGCCAAG
TTAACGGGCG CTACCCTAAC CGACCAGAAG GTTATTTTCG AAGCGCTCCC CTATTCAAAA
ACCCGGCACC ATTACGGCTC CCGGATGGCG TTCGACAACA AAGGCTTCCT GTTTGTTTCG
GTGGGTGAGC GGGGCAATGA AAAAGAGAAT CCCCAAACCA TCACGAACGA TCTGGGTAAA
GTCCATCGCC TGCATGACGA CGGGCGCATA CCGGCAGACA ACCCGTTTGT GAACGACAAA
ACCGCTCGGG CGTCCATCTA TTCGTATGGG CACCGGAATC CGCAGGGTAT GATGAAACAC
CCTGTTACGG GCGAAATCTG GACGAATGAG CACGGTCCAC GCGGTGGCGA TGAGCTAAAT
ATTGTCAAAA AAGGCAGCAA TTACGGCTGG CCAGTCATTT CGTACGGTAT TAATTACGAC
GGGAAACCCA TCACGGCCCT GTCGGCTAAA GAAGGTATGG AGCAGCCTCT CACCTACTGG
CTTCCGTCCA TTGCGCCCTC GGGTATGGCG TTCGTTAACA GTTCAAAGTA TCCCGGCTGG
AAAGATAATG TACTCATCGG CTCGTTGCGG TTTCAATACC TGAATCGTTG CGTAATGAAG
GGTAACAAAG TGGTTAAGCA GGAAAAACTG CTGCCAAACA TCGGTCGCGT CCGAAACATC
AAACAGGGAC CCGACGGGTA TTTGTATGTG TCGGTTGAAG ACCCTGGCTA CGTATTTCGG
TTAATGCCCG TGTCCATGTA A
 
Protein sequence
MLKFTISAAF AAVFLLSSFF TEQKPAAKTA RENYATYCAS CHGEKVEAFV DRKWKHGNAK 
SDLTKSISEG YPDLGMPTWK ATLSASEIDA LAELITESLK TVDQYKFTSK PTSNLFASEG
QTVKLDTIAK GLNSAWGLAF LPNDELLITD RSGDIYRVDK NRQKVKVTGG PTVLAEGQGG
LLDVVLHPDF AKNQLVYFSY SAVKNEGDQK LSTTAVMCAK LTGATLTDQK VIFEALPYSK
TRHHYGSRMA FDNKGFLFVS VGERGNEKEN PQTITNDLGK VHRLHDDGRI PADNPFVNDK
TARASIYSYG HRNPQGMMKH PVTGEIWTNE HGPRGGDELN IVKKGSNYGW PVISYGINYD
GKPITALSAK EGMEQPLTYW LPSIAPSGMA FVNSSKYPGW KDNVLIGSLR FQYLNRCVMK
GNKVVKQEKL LPNIGRVRNI KQGPDGYLYV SVEDPGYVFR LMPVSM