Gene Slin_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2894 
Symbol 
ID8726645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3495853 
End bp3497748 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content53% 
IMG OID 
Productacetate/CoA ligase 
Protein accessionYP_003387706 
Protein GI284037776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCC GAACCTTTAA CGAGTACCAG GAAGCCTACA AGCACAGTGT AGAAGACCCT 
GAATCTTTCT GGGCCGAAAT TGCTCAGGAA TTTCAATGGC GTAAACCCTG GACCAAAACA
CTGCAATGGA ATTTCGATGA ACCCAACGTG AAGTGGTTCA CCGGAGGCAA ACTCAACATT
ACGGAAAACT GTCTCGATCG TCACCTGCTT ACCCAGGGCG ATCAACCTGC TATTATCTGG
GAACCCAACG ACCCTAATGA AGCAAGTATT ACCCTGACTT ACCGGATGCT CCACGACCAG
GTGTGCCGAT TCGCCAATGT GCTGAAACGC AATGGCGTAG TTAAAGGCGA CCGGGTTTGT
ATTTATATGC CGATGGTGCC CGAACTGGCT ATTGCCGTTC TGGCCTGCGC CCGTATCGGG
GCCGTTCATT CGGTGGTTTT TGGCGGTTTT TCGGCACAAA GTATTGCCGA CCGGATTAAT
GACGCCCAGT GCAAAGTGGT CGTTACGGCC GATGGAGCTT ACCGGGGCAA CAAGGAAATT
CCGCTCAAAA GCACGGTCGA CGATGCCCTG ATCGGCTGCC CGAGCGTACG AAAAGTGATT
GTTCTGACCC GTACCCGTAC CCCGGTATCC ATGCTTAAAG GCCGCGACAT CTGGTGGGAA
CAGGAGCTAA AGCAGGTCAC CGCCGATTGC CCTGCCGAGG AAATGGACGC CGAAGATATG
CTCTTCATCC TCTACACCTC CGGCTCAACG GGCAAGCCAA AAGGCGTTGT GCACACCTGT
GGTGGGTACA TGGTCTACGC AGCCTACACG TTCCAGAATG TGTTCCAGTA CGAGCCCGGC
GATATTCACT TCTGCACGGC CGATATTGGC TGGATTACCG GACATAGCTA CATTGTATAC
GGCCCACTGG CCTGCGGAGC CACGTCCATA ATTTTTGAAG GAACGCCGAC CTATCCGGAT
TACGGCCGCT TCTGGGACAT AACAGACAAA CATAAAGTCA ACATTCTGTA CACGGCACCA
ACGGCCATTC GGTCGCTGAT GGGCTTCGGG CTGGATAAAG TAGAAAACCA CGACCTGAGC
AGCTTACGGG TGCTCGGTTC CGTGGGCGAA CCCATCAACG AAGAAGCCTG GCACTGGTAC
GACGATCATA TCGGTAAAAA CCGATGCCCT ATTGTCGATA CCTGGTGGCA GACCGAAACG
GGTGGTATTC TGATTTCACC TTTGGCCAGT ATCACTAAAA CAAAACCAAC CTACGCAACC
CTTCCCCTGC CGGGTATTCA GCCGATTCTG GTCGATGAAA ACGGTAAGGA GATCGAAGGA
AACGGTGTGA GCGGCAATCT GTGCATGAAG TTTCCGTGGC CGGGCATTTT ACGGACGACC
TACGGCGACC ACGAACGCTG CCGACAAACG TATTTTGCTA CTTATCCGGG TTTGTATTTT
ACAGGCGATG GCTGTCTGCG CGATGAAGAT GGCTATTACC GGATTACAGG TCGCGTGGAT
GATGTACTCA ACGTATCCGG GCACCGCATT GGTACGGCCG AAGTCGAAAA CGCCATCAAC
ATGCACACGG GCGTGGTTGA AAGCGCAGTC GTTGGTTACC CGCACGACAT CAAAGGACAG
GGTATCTACG CCTATGTTAT CACCGATCAG CAACCGTCCG ACCACGACGC CGACCTGACC
AAACGGGATA TTCTGGCTAC GGTAACGCGG GTTATCGGTC CGATTGCCAA GCCCGATAAA
ATTCAGTTTG TGACGGGCCT ACCCAAAACG CGTTCCGGCA AAATAATGCG CCGTATCCTC
CGTAAAATCG CCGAAGGCGA CACCAGTAAT TTGGGCGATA CGACCACTCT GCTCGACCCA
GCGGTAGTTG ACGAGATTAA GGAGGGGGCG CTGTAA
 
Protein sequence
MRIRTFNEYQ EAYKHSVEDP ESFWAEIAQE FQWRKPWTKT LQWNFDEPNV KWFTGGKLNI 
TENCLDRHLL TQGDQPAIIW EPNDPNEASI TLTYRMLHDQ VCRFANVLKR NGVVKGDRVC
IYMPMVPELA IAVLACARIG AVHSVVFGGF SAQSIADRIN DAQCKVVVTA DGAYRGNKEI
PLKSTVDDAL IGCPSVRKVI VLTRTRTPVS MLKGRDIWWE QELKQVTADC PAEEMDAEDM
LFILYTSGST GKPKGVVHTC GGYMVYAAYT FQNVFQYEPG DIHFCTADIG WITGHSYIVY
GPLACGATSI IFEGTPTYPD YGRFWDITDK HKVNILYTAP TAIRSLMGFG LDKVENHDLS
SLRVLGSVGE PINEEAWHWY DDHIGKNRCP IVDTWWQTET GGILISPLAS ITKTKPTYAT
LPLPGIQPIL VDENGKEIEG NGVSGNLCMK FPWPGILRTT YGDHERCRQT YFATYPGLYF
TGDGCLRDED GYYRITGRVD DVLNVSGHRI GTAEVENAIN MHTGVVESAV VGYPHDIKGQ
GIYAYVITDQ QPSDHDADLT KRDILATVTR VIGPIAKPDK IQFVTGLPKT RSGKIMRRIL
RKIAEGDTSN LGDTTTLLDP AVVDEIKEGA L