| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2885 |
|---|
| Symbol | |
|---|
| ID | 8726635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3486829 |
|---|
| End bp | 3487698 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF1460 |
|---|
| Protein accession | YP_003387697 |
|---|
| Protein GI | 284037767 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.261139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAC TGTCTACTAC ACTTTTCCTG TTATTTCTAT CACTCGTCGT TGTTCAGGCA
CAGGATACCA CAGCCAGCGA GTTCCGTTCG TTGACACTGA CAACGGGCAA AACCCCCGCC
GAAACGGCCA TACTGACCGG GAAACAATTT CTGGGGAGAC CCTATGTTCC CTATACTCTC
GATCAGACGC CTACGGAACA GTTGGTTGTC AATTTTCGCG AGTTTGACTG TACAACTTAT
TTAGAGAGCG TTCTGGCACT GACGCTTGCC CTGCATGATG CCGGCAGCAA GACAGGCCCT
TCAGAGCAAG CCTTTCGGAA TTACCTGACC CGGTTCCGGT ATCGAAACGG TCGAATTGAT
GGGTACGCCA GCCGATTGCA TTATTTCTCC GACTGGCTGC GCGATAATGA GCGTAAAGGA
CTGATTACCG ATGTCAGCAG CGAACTCCCC GGCAGCATCA CGGTTGCCAA ACCGGTTTCG
TACATGACCT CATCCATGTA CAAATACCCT CAATTGCGTG ACCCGAATAC CTTTAAACAG
GTGGCACTTA CCGAAGCCTC TTTGAGCCAG CAATCATTCT CCTTTATTCC GGCAAAGAAT
ATCCGGCAGG CAGAGGCTCA GTTGCAGGAC GGTGATATTG TCATGCTGCT TGCAGCACGA
CCGGGTCTTG ATATGCGACA CGTTGGGTTC GCCGTTAGAC AACCCAACGG GCGAATGCAT
CTCATGCACG CTTCCTCCGA CCAGAGTGCA GTCGTCATTT CGCCTTATCC GATCAGCGAT
TACGTCCAAT TGCATAAACG GCTATCGGGC ATACGGGTAG CCCGTCTGCG ATCCAATACG
ACCCCTGCCG TGGCGGTGGG CGGCAAGTAA
|
|---|
| Protein sequence | MIKLSTTLFL LFLSLVVVQA QDTTASEFRS LTLTTGKTPA ETAILTGKQF LGRPYVPYTL
DQTPTEQLVV NFREFDCTTY LESVLALTLA LHDAGSKTGP SEQAFRNYLT RFRYRNGRID
GYASRLHYFS DWLRDNERKG LITDVSSELP GSITVAKPVS YMTSSMYKYP QLRDPNTFKQ
VALTEASLSQ QSFSFIPAKN IRQAEAQLQD GDIVMLLAAR PGLDMRHVGF AVRQPNGRMH
LMHASSDQSA VVISPYPISD YVQLHKRLSG IRVARLRSNT TPAVAVGGK
|
|---|
| |