| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2883 |
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| Symbol | |
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| ID | 8726633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3483012 |
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| End bp | 3484904 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003387695 |
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| Protein GI | 284037765 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.917662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACTC AGTTTACTAC ACGAATAAAA ATAGTAGCGG TAGTTGTGTT TCTCGCGGGC
CTGTCAGCCG CGATGGCGCA GAGTGCCCGA ATTCAGCGGA TCAACCCAAC AAACTGGTGG
GTTGGCATGA AGAATCCAAA CCTTCAACTG CTTGTTTACG GCCCTAATGC CGGGAGCCTG
ACCTACACGA TTAATTATGC CGGGGTGAAG CTGGTAAAGG CGCACACGGT CGAGAATCCA
AATTATGCAT TTTTGGATTT AACAATTGCT CCAACAGCCA AAGCCGGAAC GCTAACCATT
GTTGGAAAGC GCGGAGGACA GACGCTTACT CAGCCGTTTG AATTAAAAGC CCGCGACAGA
TCGCCGAAAG GGCAGGGGGT AACGGCTGCC GATTTTATCT ACCTGATCAT GCCCGACCGA
TTTGCCAATG GCGACCCGTC CAACGACAAA TTCCCTGATA TGCTCGACAC CCAGGCCGAC
ACCAAAAATC CGTATCTACG GCACGGGGGT GATTTTACGG GGATTATCAA CCACCTCGAT
TATTTAAAAG ACCTTGGCGT TACGGCTCTC TGGCTTACAC CCGTAATCGA CAACGACGAA
ACCCTGAAGA AAGAAGGGCC AGACCGTAAC CAGGCGGGGT ATCACGGCTA TCATTTTACT
GATCATTACC AGATCGATAA GCGATTTGGC GGCATTGCGG GCTACGTTGA ACTGGCGTCG
GCTCTGCACA AGCGGGGGAT GAAACTGGTG CAGGACGCGG TCTATAACCA CATTAGCGAT
GACCACTGGT TTTTCAAGGA TAAACCCATG AAGGATTGGG TCAATGTATG GCCAACCTAC
ACGGGCTCTA CTCACAAGGA ACAGTCTCTT TACGATCCAC ACGGCGCAAC GGCCGACAAA
AAAACGCTTC TGGATGGCTG GTTTACGCCA TTCCTGCCTG ACCTGAACCA GCGAAATCCC
TTCGTAGCGA ACTTCCTGAT CCAGCACGCT ATCTGGTCGA CGGAAATGTT CAGCCTGGAT
GCTTGGCGCA TTGATACTTA CAAGTACAAC GACCTCGATT TCCTGAATCG CTGCAACAAA
GCGCTTATGG ACGAGTACCC GAAAATCCAC CTCTTCGGCG AATCGGTGGT CAATAATCCG
GTTGGACAGG CTTTTTTTGT GAAGAACACC GTTGGGTTTC CGTTTAAAAG CAACCAGCCG
GGCGCTCTGG ACTTTGTGCT GTATAATGCC TTCAACGACG CCCTGAATCA GCGATTCGAT
TGGGACTCGG GCGTAAACCG TATTCATCAG GTACTCGCTC AGGATGATGT CTATGCTGAT
CCCAATAAGC TGGTTACGTT TCTGGAGAAC CACGATACCG ACCGCTATCT GTCGGTGATC
GGTGAGGATT TCGATAAATA CAAGCTGGGC GTTACCTGGC TCCTGACTAC GCGCGGTATT
CCGCACTGGT ATTACGGTAC GGAAATCCTG ATGAAAGGCA CCAAAAATCC CAGTGATGCC
GAAGTCAGGA AAGATTTTCC GGGCGGTTTT CCGGGCGATA AAGAAAACAA GTTTGAAGCC
GCCGGACGGA CTGATCGCGA AAATGAAGCC GTTCAATATG TCCGTAAACT GGCTACATAC
CGACGTAACA ATCCCGTTCT CCAAGTCGGA AAACTTACAC AGTTTGTACC GCAGGAAGGA
ACATACGTCT ATTTCCGGCA CGACGCTAGT AAAACGGTAA TGGTTGCTTC CAACACCGGC
GATAAAGAAA TATCGCTCGA TACATCGCGC TTTGCCGAAC GAATGAACGG ATTTACATCG
GCGCGAAATG TACAAACCGA CGCCCTGCTC ACGGACCTGA AAATGATAAA GCTTCCGGCT
AAATCGGCGC TCGTGCTGGA GTTGATAAAA TAA
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| Protein sequence | MYTQFTTRIK IVAVVVFLAG LSAAMAQSAR IQRINPTNWW VGMKNPNLQL LVYGPNAGSL
TYTINYAGVK LVKAHTVENP NYAFLDLTIA PTAKAGTLTI VGKRGGQTLT QPFELKARDR
SPKGQGVTAA DFIYLIMPDR FANGDPSNDK FPDMLDTQAD TKNPYLRHGG DFTGIINHLD
YLKDLGVTAL WLTPVIDNDE TLKKEGPDRN QAGYHGYHFT DHYQIDKRFG GIAGYVELAS
ALHKRGMKLV QDAVYNHISD DHWFFKDKPM KDWVNVWPTY TGSTHKEQSL YDPHGATADK
KTLLDGWFTP FLPDLNQRNP FVANFLIQHA IWSTEMFSLD AWRIDTYKYN DLDFLNRCNK
ALMDEYPKIH LFGESVVNNP VGQAFFVKNT VGFPFKSNQP GALDFVLYNA FNDALNQRFD
WDSGVNRIHQ VLAQDDVYAD PNKLVTFLEN HDTDRYLSVI GEDFDKYKLG VTWLLTTRGI
PHWYYGTEIL MKGTKNPSDA EVRKDFPGGF PGDKENKFEA AGRTDRENEA VQYVRKLATY
RRNNPVLQVG KLTQFVPQEG TYVYFRHDAS KTVMVASNTG DKEISLDTSR FAERMNGFTS
ARNVQTDALL TDLKMIKLPA KSALVLELIK
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