Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2882 |
Symbol | |
ID | 8726632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3481257 |
End bp | 3482843 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003387694 |
Protein GI | 284037764 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGATC AATGGCCTTC CGATGGTGTG TTAAATCGAT CGCCCGAAGC GGTTCGTCTG GCATTGGCTG CCTTTGATGC GTCATTGAAT AGTATAGTTT CTATGACAGC CATTCGGGAT GACAACGGCC AGATCGTGGA TTTTCGAATG CAAACAGCCA ATAAGTCCGT TGAGCAGAGT TTAGCCATGA CTCCCGATAA GATCATTGGG ACGCGGCTAT TGGAAACGTT TCCCGGTAAT CTCGAATCGG GCCTGTTCGA CATCTACGTA CGGGTTGTAA CGACCGGAAA GCCGGAGCAG ACAACCCAGT ACTACAAAGA CGATAAGGGG TTGGAGGCTT GGTTTACGGT GTCTGCCGTA CTTCAGGAGC CGGAGACCGT TGTGGTCACA TTCATGAACG TGACCGACAG CAAACAGGCC GAACTGGCAT TGAAAAGACA GGCAGACCTG TTTCAGACGG TGCTCGACCA CGTTCAGGCT GCCATATCGC TGCACGAAGC TATTCGGGAT TCGAATAATA AAATTGTTGA TTTTCGGACG GTAATGGCTA ACCGACGTGC CAAACTGATG TGGGGTGATC TGGCTGAGCC GATCATGAAT CAAACGTTTA CGGAGGTGGC TTCAACGGAG CAGCTGAAGC AGGATTTCAT TAAATACATT CGGGTAGTCG AAACGGGCGA GCCAGACCTG ACCGAGTTTA ACATCGGAGA ACAGTGGTGG CTCCGAATGA CAGCGCGGTC GGGCGATGGG GTTGTTATTT CGAACATGAA CATCTCCGAA AATCGCCATT ACCGGCAGCA GCTTGAAGCC GCCAACACAG AACTTAAGCG GTCCAACGAA GATCTTCAGT CTTTTGCCTA TATCGCTTCG CACGACTTAC AGGAGCCACT GCGCAAAATT CAGGCCTTTG GCGACATTCT GAAAGAGCAG TATTCTCCTT TGCTGGACGC CGAGGGACAG TACATGATTG ACCGGATGCA GTCGGCAGCC GAGCGAATGT CTTCGCTGAT CAGGGATTTG CTCGATTACT CCCGGATTGC GTCCCAGCGG GATATGTTTC ACTCGTTTTC GCTGACCCGA CTGCTGGAGG ACATTATAGA GGATTTATGG CATCCCATTC AGCACACCCA TGCACGAATC GAATTGGGTG GTGGTCATCC ATTACCCGAT CTGATCGGCG ACCGGTTTCA GTTGCGACAG CTCTTTCAAA ATTTACTGTC CAATGCCCTT AAGTTCTACC GCACCGATGA GGATGGTCGG CCGGTACCAC CCTTAATAAC CGTTTTGGCG CGGGGGACGA AAGCCGTCGA TTTACCTGCT GATGTACAAC AGGATTTACC CGCGAACCAA CAGTTGTTTT GGGTAGTCAG CGTAGCGGAC AATGGTATTG GATTTGATCA AAAACATGCA GACCTTGTTT TTGAAGTTTT CAAACGATTG CATACCCGGC AGGAGTTTGA TGGAACCGGA GTTGGCCTGG CCGTAGTCAA AAAAGTTGTA GAGCAGCATG GTGGCGCCAT TCGGGTGCAG AGCGAGCTGG GAAAAGGTAC CACCTTTACA ATCTATCTGC CCGCTTATAT CGGCTGA
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Protein sequence | MHDQWPSDGV LNRSPEAVRL ALAAFDASLN SIVSMTAIRD DNGQIVDFRM QTANKSVEQS LAMTPDKIIG TRLLETFPGN LESGLFDIYV RVVTTGKPEQ TTQYYKDDKG LEAWFTVSAV LQEPETVVVT FMNVTDSKQA ELALKRQADL FQTVLDHVQA AISLHEAIRD SNNKIVDFRT VMANRRAKLM WGDLAEPIMN QTFTEVASTE QLKQDFIKYI RVVETGEPDL TEFNIGEQWW LRMTARSGDG VVISNMNISE NRHYRQQLEA ANTELKRSNE DLQSFAYIAS HDLQEPLRKI QAFGDILKEQ YSPLLDAEGQ YMIDRMQSAA ERMSSLIRDL LDYSRIASQR DMFHSFSLTR LLEDIIEDLW HPIQHTHARI ELGGGHPLPD LIGDRFQLRQ LFQNLLSNAL KFYRTDEDGR PVPPLITVLA RGTKAVDLPA DVQQDLPANQ QLFWVVSVAD NGIGFDQKHA DLVFEVFKRL HTRQEFDGTG VGLAVVKKVV EQHGGAIRVQ SELGKGTTFT IYLPAYIG
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