Gene Slin_2882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2882 
Symbol 
ID8726632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3481257 
End bp3482843 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content51% 
IMG OID 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_003387694 
Protein GI284037764 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGATC AATGGCCTTC CGATGGTGTG TTAAATCGAT CGCCCGAAGC GGTTCGTCTG 
GCATTGGCTG CCTTTGATGC GTCATTGAAT AGTATAGTTT CTATGACAGC CATTCGGGAT
GACAACGGCC AGATCGTGGA TTTTCGAATG CAAACAGCCA ATAAGTCCGT TGAGCAGAGT
TTAGCCATGA CTCCCGATAA GATCATTGGG ACGCGGCTAT TGGAAACGTT TCCCGGTAAT
CTCGAATCGG GCCTGTTCGA CATCTACGTA CGGGTTGTAA CGACCGGAAA GCCGGAGCAG
ACAACCCAGT ACTACAAAGA CGATAAGGGG TTGGAGGCTT GGTTTACGGT GTCTGCCGTA
CTTCAGGAGC CGGAGACCGT TGTGGTCACA TTCATGAACG TGACCGACAG CAAACAGGCC
GAACTGGCAT TGAAAAGACA GGCAGACCTG TTTCAGACGG TGCTCGACCA CGTTCAGGCT
GCCATATCGC TGCACGAAGC TATTCGGGAT TCGAATAATA AAATTGTTGA TTTTCGGACG
GTAATGGCTA ACCGACGTGC CAAACTGATG TGGGGTGATC TGGCTGAGCC GATCATGAAT
CAAACGTTTA CGGAGGTGGC TTCAACGGAG CAGCTGAAGC AGGATTTCAT TAAATACATT
CGGGTAGTCG AAACGGGCGA GCCAGACCTG ACCGAGTTTA ACATCGGAGA ACAGTGGTGG
CTCCGAATGA CAGCGCGGTC GGGCGATGGG GTTGTTATTT CGAACATGAA CATCTCCGAA
AATCGCCATT ACCGGCAGCA GCTTGAAGCC GCCAACACAG AACTTAAGCG GTCCAACGAA
GATCTTCAGT CTTTTGCCTA TATCGCTTCG CACGACTTAC AGGAGCCACT GCGCAAAATT
CAGGCCTTTG GCGACATTCT GAAAGAGCAG TATTCTCCTT TGCTGGACGC CGAGGGACAG
TACATGATTG ACCGGATGCA GTCGGCAGCC GAGCGAATGT CTTCGCTGAT CAGGGATTTG
CTCGATTACT CCCGGATTGC GTCCCAGCGG GATATGTTTC ACTCGTTTTC GCTGACCCGA
CTGCTGGAGG ACATTATAGA GGATTTATGG CATCCCATTC AGCACACCCA TGCACGAATC
GAATTGGGTG GTGGTCATCC ATTACCCGAT CTGATCGGCG ACCGGTTTCA GTTGCGACAG
CTCTTTCAAA ATTTACTGTC CAATGCCCTT AAGTTCTACC GCACCGATGA GGATGGTCGG
CCGGTACCAC CCTTAATAAC CGTTTTGGCG CGGGGGACGA AAGCCGTCGA TTTACCTGCT
GATGTACAAC AGGATTTACC CGCGAACCAA CAGTTGTTTT GGGTAGTCAG CGTAGCGGAC
AATGGTATTG GATTTGATCA AAAACATGCA GACCTTGTTT TTGAAGTTTT CAAACGATTG
CATACCCGGC AGGAGTTTGA TGGAACCGGA GTTGGCCTGG CCGTAGTCAA AAAAGTTGTA
GAGCAGCATG GTGGCGCCAT TCGGGTGCAG AGCGAGCTGG GAAAAGGTAC CACCTTTACA
ATCTATCTGC CCGCTTATAT CGGCTGA
 
Protein sequence
MHDQWPSDGV LNRSPEAVRL ALAAFDASLN SIVSMTAIRD DNGQIVDFRM QTANKSVEQS 
LAMTPDKIIG TRLLETFPGN LESGLFDIYV RVVTTGKPEQ TTQYYKDDKG LEAWFTVSAV
LQEPETVVVT FMNVTDSKQA ELALKRQADL FQTVLDHVQA AISLHEAIRD SNNKIVDFRT
VMANRRAKLM WGDLAEPIMN QTFTEVASTE QLKQDFIKYI RVVETGEPDL TEFNIGEQWW
LRMTARSGDG VVISNMNISE NRHYRQQLEA ANTELKRSNE DLQSFAYIAS HDLQEPLRKI
QAFGDILKEQ YSPLLDAEGQ YMIDRMQSAA ERMSSLIRDL LDYSRIASQR DMFHSFSLTR
LLEDIIEDLW HPIQHTHARI ELGGGHPLPD LIGDRFQLRQ LFQNLLSNAL KFYRTDEDGR
PVPPLITVLA RGTKAVDLPA DVQQDLPANQ QLFWVVSVAD NGIGFDQKHA DLVFEVFKRL
HTRQEFDGTG VGLAVVKKVV EQHGGAIRVQ SELGKGTTFT IYLPAYIG