Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2871 |
Symbol | |
ID | 8726621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3467731 |
End bp | 3469194 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387684 |
Protein GI | 284037754 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000385856 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGAC TTTTTTTATT ACTTATCCTA TTCTGCCCTG TTTTCTTTCT GTTTACCTAT AATTCAACGT ATGGCTACGA CGCGCTGGAA TATTTGGTCA TTGCGCGTTC GCTCAACGAA GGGTATTCGT TATATGATTT CATTCCGTCT AAGTCATACC TGATTTACGC ATCGACCAAC GTGCTGCTAT CGCTGCTGGG TGGGTATAAC CATGCTAGTG TTTCGGGTTT GATCACGTTG CTGGCAATGG GTTGTGTACT GTCGGCCTGG CGGGCTGCTC GTCAATTTGG GGAGCGGGCT GCCCTTATTA CGGCTGCGCT GACGGCTGCC TGCTGTTTTT TCATGGAAAT GAATTTCCTG GAACCCGAAA GCTGGATTGG TATTTTCGGT CTTAATGCGT TTTTGCTGGC TACTGACGGC AAGGAACAGC CGGGCTGGCG ATGGCTGGGA GCGGGTGTCC TGCTCGGTCT TGCCATGTGT TTTAAGAGTG TGGCGGCTTT TTATGTCGTC GGATTCGGCG CTTTCATCCT GCTCTTATGG CTTGCCGGAC GGCTTACCTT CTGGCCGATG GTAGTCAGAG GGATGCTGGT GCTGCTGGGT TTTCTGCTGC CGCTGGCGCT CTCCGCTTTG TATTTTTACC TGACGAACCG GTTAGATGCT CACCTGGAAT GGACGTACAT TTATCCCTTT GGTGGCTATC CATCCCATAC AATTTTTCTG GTTAAGTTCC TGATAAAACT AAGCTGGTTC CTGCTCCTGC TGGCGGTGTC GATCGGTTTA CTGGTACGAC AACCTTACCG GGCCGCGTAC CAGCGGACAC CCGCCCTTTG GCTGGCGTTG CTGCTGGCGG GTTTTTCCTG TATCGCCATG CTGAAAACGC AGGCAAGCCA TTACTTCTTC CCGGCGGCCG TTTTCTTCTC GGTTCATCTG GGCTTTATGG CCGATAAGTG GTTAGGACAG TACGAACGGC GGCATACCAG TGTACCTTAC CGGTCTATAT TCATGGGCAT TGGGGCTGTG GGTATACTGG TACTGATCAG TGCGTTTTTG TACCGGCCCG ATGCGATCAA ACGATTCGTG ACGATTGCCG ATTATTCGGG CGAGAAAGAG GCCGGTGATT TCATTCGTGA ACAGGCCGGA CCCAACGGGA AAGTCCTGCT GTTTGACAAT GCCCTGAGCT TGTACTACCT GTCGGATCGG GAGCCAAACG TACCTTTCTT TTTTACGGAG ATGCAGACAA CACACTATAT AAAGTCGCAT CCGGACACCT ACAAGCACGC TTTAGCCGAT ACGAGTTTGA AGATGGTTGT GTTTGGGAAT CGGTCGAGCG TTATCGACGA TAGTACTGCC CTGAATAATC CTGCCAATGC CTATGCTATC CGGCAGTTAC GGGCAGGGTT ACAAAAAAAC TTTGTGCAAG TTAAAAACCC ACGCTTCCCG CTACTGTACT GGGTTCGTAA GTAA
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Protein sequence | MTRLFLLLIL FCPVFFLFTY NSTYGYDALE YLVIARSLNE GYSLYDFIPS KSYLIYASTN VLLSLLGGYN HASVSGLITL LAMGCVLSAW RAARQFGERA ALITAALTAA CCFFMEMNFL EPESWIGIFG LNAFLLATDG KEQPGWRWLG AGVLLGLAMC FKSVAAFYVV GFGAFILLLW LAGRLTFWPM VVRGMLVLLG FLLPLALSAL YFYLTNRLDA HLEWTYIYPF GGYPSHTIFL VKFLIKLSWF LLLLAVSIGL LVRQPYRAAY QRTPALWLAL LLAGFSCIAM LKTQASHYFF PAAVFFSVHL GFMADKWLGQ YERRHTSVPY RSIFMGIGAV GILVLISAFL YRPDAIKRFV TIADYSGEKE AGDFIREQAG PNGKVLLFDN ALSLYYLSDR EPNVPFFFTE MQTTHYIKSH PDTYKHALAD TSLKMVVFGN RSSVIDDSTA LNNPANAYAI RQLRAGLQKN FVQVKNPRFP LLYWVRK
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