Gene Slin_2865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2865 
Symbol 
ID8726615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3461400 
End bp3462626 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content51% 
IMG OID 
Productprotein of unknown function DUF214 
Protein accessionYP_003387678 
Protein GI284037748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.649018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACGTTC CTGTTTTTCT GGCCCGAAAA GTCCGTCATG CTCCGGAAGG AAGCTTTTCG 
GCTACTGTTA CGCGCGTTGG CATCGCCAGT ATTGCGCTTG GACTGGCGAT TTTGATTGTC
GCCTTTGCGG TTTTGTTTGG CTACAAACGC ACCATTGAGC AGAAGATATT TTTGTTCGGT
GCCCACTTAC AGGTCAGCAA ATTCACCAAC AATGCATCCT ACGAGGAAAC AGCCCTCTCG
CTCAAAACCA CACTTTACCA GGATAGCACC AAAATTCCCG GCGTACGGCA TATTCAGGCC
GTTGCCCTGA AAGCGGGGAT TTTAAAAACC CCCGAGGAAT TAACGGGCGT CATTCTGAAA
GGCGTTGGCA AAGACTACGA CTGGAATCTG TTCAAAGAGT CACTGGTGGC TGGAACCGTA
CCCGTGGTGG GAGCCGATAC GGGCTCCGGC TCTACACAGC TCCTGCTCAG CCAACTCATG
GCCAACCAGT TGAAGGTAAA AGTGGGCGAT GCTGTACCGC TTTACTTTCT GGGAAACCCA
CCCCGCGCCC GAAAGATGAC CGTAGTAGGC ATTTACGAAA CCGGCCTCGA AGAAGTCGAT
AAGACCATTG CCCTGGGCGA TATTCGGCTG GTGCAGAAAC TTAACCGCTG GGGTCCCGAT
TCGGTGGGAA GCTACGAGAT TTATGTGAAC GATTTCAATC AGTTGAATTT GACCGCCAAT
AATGTATTCC AGGCCATGGC ACCCGATATG CGCTTAACGA GGGTGACTGA TCAGTACCGC
CCCCTATTTG ACTGGATGCT GCTGCTCGAC CGGAATATGG TTATTCTACT GGCACTGATT
ACGTTCGTAG CCTCGTTCAA TATGGTTTCT GTACTACTCG TCTTGATGAT GGAGCGTACT
CCCATGATTG GACTGCTCAA GGCGCTGGGG GGAAACAATG CCCTTATTCG AAGGATGTTT
GTTTTTGTAG GGCTTAATAT GGTCGGCTGG GGGCTACTCA TCGGCAACCT GGTTGGGTTT
GGCCTATGCT TCGCCCAGGA ACGCTTCAAA CTAATTCCCC TCGACCCCAA GAATTACTTT
GTGAGCTACG TCCCCATCGC CTGGGACTGG AAAACGATTC TGGCCCTGAA TGGTGCCACA
GTGATTATGA TTGGCCTCGT CCTCTGGCTA TCGACCATTC TCATCAATCG TATTCAGCCT
GTGAAAGCGC TGGCGTTTAA AAAATAG
 
Protein sequence
MNVPVFLARK VRHAPEGSFS ATVTRVGIAS IALGLAILIV AFAVLFGYKR TIEQKIFLFG 
AHLQVSKFTN NASYEETALS LKTTLYQDST KIPGVRHIQA VALKAGILKT PEELTGVILK
GVGKDYDWNL FKESLVAGTV PVVGADTGSG STQLLLSQLM ANQLKVKVGD AVPLYFLGNP
PRARKMTVVG IYETGLEEVD KTIALGDIRL VQKLNRWGPD SVGSYEIYVN DFNQLNLTAN
NVFQAMAPDM RLTRVTDQYR PLFDWMLLLD RNMVILLALI TFVASFNMVS VLLVLMMERT
PMIGLLKALG GNNALIRRMF VFVGLNMVGW GLLIGNLVGF GLCFAQERFK LIPLDPKNYF
VSYVPIAWDW KTILALNGAT VIMIGLVLWL STILINRIQP VKALAFKK