Gene Slin_2863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2863 
Symbol 
ID8726613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3456830 
End bp3458848 
Gene Length2019 bp 
Protein Length672 aa 
Translation table11 
GC content48% 
IMG OID 
Productprotein of unknown function DUF303 acetylesterase putative 
Protein accessionYP_003387676 
Protein GI284037746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.515919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.787777 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATGGG CCGGTGCATG GGCGCAGCCA GCGTTAAGGC TCGATCAATG GCCCGCCAGA 
CTACAACTGT ACCCTCGTAA TCAATTAAGT CAATGTACCG TCGCTATCTC CGGACGGACT
ACCGCAGGCG ATGTGAAGGC CATTTCTCTG GTGGTCGCCA GAGATAATAA ACCGTATCAG
TATAGTAAAA TTACTCCCGA TTCACTGACC GGGCACTTTG CCTTTAGCCC GGTCATAAAA
GCGGAACTGA ATCAGTACAG CTTTCAGGTA TTCGTGCATG GAGTTCCAGG CAGAGATTCT
GTACGGGTAG CCTTTCGGGA CAGCATTGTT TGTGGCGATG TTTTCCTGAT AATGGGGCAG
TCGAATGCGG TTGGACAATA TGGGGATTAT ACCTTCCGGA GTACGTTCTG CCGCACGTTT
GGCATACACA ACTTCAATAA TACGTATAAT CCGGCTGATA CGGCCTGGTG TCTGACAAAC
ACCAAAGAGG GGCTTACCTG CCTGTGGGGT ATGGAATTGC AACGGATGAT CAAGGAAAAT
CAGGGCATTC CAACGGCAGT TATAAACGGT GCTGTTGGCG GGACCACGAT TACCAGTCAT
GCCAATCGGG ATGCCAGTCA GCCCACGTCG TTAAGTACAC TTTACGGGCG CTTACTGTAC
AGGGCAAGTA AGGCAGGTGT GGCCCGTCAG GCAAAAGCCA TGATCTGGCG GCAGGGTGAA
GCCGAAGCTG CCAATAATCC GGACGTTTAT GTCCGCACCT TTCCCCAATT ATATAGCTAC
TGGAAGCAGG ATTACCCCGG TCTGAAAAAA ATCTATCATT CGCAGATAAA TATATTGACC
AATAATGTAG TCAATGCGGG CGTTCTACGG GACTATCAAC GCCGTTCCAA ATACATTTTC
TCCGACAATG AGCCTATTGC TACCGTTGGT TTATCCGGCT ACGAGGGCAT CCATTACAAT
GAAGCGGGCC ACTATCAATT CGGTCTGGAA CTGTATCGGC TCATCGCGCG TGATTTTTAT
GGCGTAGTTG ATACCACTGG TCTGGGGTCG CCAAACCTGC AAAAACTTTA TTATAGCAAG
CCGGGACAGG ATGAAATAAC TCTTGAATTC GAACCGATTC ACAAAATGTG CTGGCCCGCT
GATACAACCA TCATTCGTAA TGGTCAGGAG TACACGCAGC GTATGTCGAA TTTTATCTAT
ACCGACTATC CGGCGGGCGA AACCGGTTTA ATAAAGTCAG TTACCGAACG GGGAAACACA
TTAATTTTGG CATTGACAAA ACCTGTCAAT GCCAAACACC TGACCTATTT ACCCTCTTCT
TACCAGGATA ATCAGGTTGG CTTTTACGTG GGTCCGGTTA TTCGTAGTAA ATTAGGTATG
CGGGCATTGA GTTTTTACCA AATGGCCATT GCCGCGCCCT TACCGGCGGC TATGAATTTG
CGGGCTGCTG CTGTAGATAC AAGTGCCATA AAACTTAGCT GGGATAATAA AACAGATAGT
CTTACTACCT GGTCTATTGA ACGGGCCGAC ACAAGTAGCA TTTTTACACA AATAGCGGTA
CTGCCGGGCT CCAGCCAAAC GTATCAGGAT CTGCGAGACC GTAACTTGGC GAATTCACTT
AAAGCTGGAA AACTATACCA ATATCGTATC CGCTCCGTGT CTTTGCGGTC TGCATCCGAT
TATTCGCCTG TTGTTAAGGC CATGGTGCAG GATGTAAAAC TATTGCCTCA ACTGGAAGTC
GAAAGTGCAC CGGCTGGCAT TGGTTCCGGA ACATTATTAT ATCCTAATCC TGCCGATACC
CAGGTAACCG TCCGGCTTCC TCTGGAGTGG AGTGGGGATA GGATTTGGCT TACGCTGACA
AACGAGGCAG GGAAGGTTGT TTTGCAGCGT AGTTACCAGA TGTCATTGGG TGCAACATCC
CTAACGTTTT CTGTTGCTAC GCTGCCTTCA GGTGTTTATA TTGTCTCGCT CGGTTATGGT
ATGGGGGGCA TTAAATGTCG GCTGGTTGTG GCCCATTAA
 
Protein sequence
MAWAGAWAQP ALRLDQWPAR LQLYPRNQLS QCTVAISGRT TAGDVKAISL VVARDNKPYQ 
YSKITPDSLT GHFAFSPVIK AELNQYSFQV FVHGVPGRDS VRVAFRDSIV CGDVFLIMGQ
SNAVGQYGDY TFRSTFCRTF GIHNFNNTYN PADTAWCLTN TKEGLTCLWG MELQRMIKEN
QGIPTAVING AVGGTTITSH ANRDASQPTS LSTLYGRLLY RASKAGVARQ AKAMIWRQGE
AEAANNPDVY VRTFPQLYSY WKQDYPGLKK IYHSQINILT NNVVNAGVLR DYQRRSKYIF
SDNEPIATVG LSGYEGIHYN EAGHYQFGLE LYRLIARDFY GVVDTTGLGS PNLQKLYYSK
PGQDEITLEF EPIHKMCWPA DTTIIRNGQE YTQRMSNFIY TDYPAGETGL IKSVTERGNT
LILALTKPVN AKHLTYLPSS YQDNQVGFYV GPVIRSKLGM RALSFYQMAI AAPLPAAMNL
RAAAVDTSAI KLSWDNKTDS LTTWSIERAD TSSIFTQIAV LPGSSQTYQD LRDRNLANSL
KAGKLYQYRI RSVSLRSASD YSPVVKAMVQ DVKLLPQLEV ESAPAGIGSG TLLYPNPADT
QVTVRLPLEW SGDRIWLTLT NEAGKVVLQR SYQMSLGATS LTFSVATLPS GVYIVSLGYG
MGGIKCRLVV AH