Gene Slin_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2858 
Symbol 
ID8726608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3453181 
End bp3453669 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content44% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387671 
Protein GI284037741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.262338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.333542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGTT TCTCCTGCGA TCTGAACATG ATGAGCAACG ATACAGAAAA CAACAATCAA 
TCCTACCGTG AGGCATCTCA GCAGCCGGAA TTACCTGCCA ATAGTGAGGT AGTGGTGATT
CCGGTCATTG AAGAAAGTCT GCATGTTGAT AAACAACTCG TAGAAACGGG TAAACTGCGG
ATTGTTAAGC GGATTCACGA AGAGGAGCAA GTGATTGATT TACCCTTGTC TCGTGAAGAA
TTTGATGTAC AACATATTGC TATCAATGAG TACGTGGATA TGCCACCAGC CGTTCGCTAC
GAAGGCGACA CAACGGTATA TCCAGTACTG AAGGAAGTTT TGGTTATTGA AAAAAAGTTG
GTATTGGTTG AAGAAGTACG CGTAACCAGG CGACTGGTTA CGGAAAATGA GCCACAGCGA
GTGGTTCTCA GAAAAGAGGA AGTCAGTGTA GAACGGATTT CCGATGAACT TGAACGTTCG
GCTTTGTAA
 
Protein sequence
MLSFSCDLNM MSNDTENNNQ SYREASQQPE LPANSEVVVI PVIEESLHVD KQLVETGKLR 
IVKRIHEEEQ VIDLPLSREE FDVQHIAINE YVDMPPAVRY EGDTTVYPVL KEVLVIEKKL
VLVEEVRVTR RLVTENEPQR VVLRKEEVSV ERISDELERS AL