Gene Slin_2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2851 
Symbol 
ID8726601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3443009 
End bp3445444 
Gene Length2436 bp 
Protein Length811 aa 
Translation table11 
GC content53% 
IMG OID 
Productpeptidase S9 prolyl oligopeptidase active site domain protein 
Protein accessionYP_003387664 
Protein GI284037734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.342438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.410655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGTC TCTACGCTTT GTTTGCGCTG CTGTCCAGTG CATCCGCTGT TGCCCAGTCT 
AGCCCGCAAA AACCCACACC CCTCACCGTC GAAACCATCA TGCAGGACCC GAAAAGCTGG
GTCGGCACAT CCCCTTCCAA CCCCTTCTGG TCCGACGATT CGAAAACCCT TTATTTTAAC
TGGAACCCCG ACCGTACACT GGGCGACTCG CTCTATAAAG TAACGTTCAC CAGCTTAGTT
CCACGTTCCG GCCGTACCAG ATTGCTGGCC GCATCGCAGC CAGTGAAAGT GAGCCCAACG
GAACGGCGGG CCCTGCCTGC GCCCCCGGTG TCGGCCTTCA ACCTTGCCTA TACGCAACGG
GTATTTGACC GGCAGGGCGA CTTGTTTTTA CTCGATCTTA AATTCGGATC GGTGCGGCAA
CTAACGAATA CCGTCGAAGT CGAAACAGAC CCCACTTTTT CCGGTGATCA AAAACAGGTG
ATTTTTCGGC GAAGCGGGAG CAACCTGTTC AGTATCGACT TAAAAACCGG ACAGCTAACC
CAACTCACCG ACTTTAAACC AGGCTCGAAA AAGGCGGATA CGAAACTTAC CGACGAAGAA
AAATTCCTCA AACAGGACCA GCTTCGCCTA TCGTCCGTCC TGAAAGAACG CAAGGAAAAG
AAAGACGAAG CCGACCGAAT CAGTAAGGCA GATCAACCCA AACGCCCGAA AGAAATTTAT
CTGGACGATA AAACCCTCGT TAATCCGACA CTCAGCCCCG ACGGTCGTTT TGTCACCTAC
CGGCTCATGA AGCGGCCTAC CAATGCCAAA ACAGCGCAGG TACCAAACTA CATTACGGAA
TCTGGTTATA CGGAAGAAAT CGCGGCTCGA ACGAAGGTTG GCGCGCCCGT GGCCAGTCAG
GAGTTTTTTG TTTATGACAT TGCTAAAGAC ACCGTTCGGG CGGTTTCGGT GAAGGATATT
CCAGGTATTA CCGATAAGCC AGCTTACCTG CAATCGACGA AGGCCGACAC CGCAAAAAAA
GTACGTCCGG TGGCCATTAG TAGCCCTGTT TGGTCGGAAG ATAGCAAGTT TTGTGTCGTC
GTTGTCCGCT CGCTCGACAA CAAAGATCGC TGGATTATGC GACTCCAGCC CGAAACCCTG
AAGCTGTCTC TCCTCGACCG CCAGCATGAA GATACCTGGA TTGGCGGGCC GGGAATCGGT
TCGCAGAATT CTCCGGGCAG TATGGGATTT CTGGGCGATA ATCAAACCCT CTGGTTTCAG
TCGGAAGCCG ATGGCTACTC ACACCTGTAC ACCGTCAATG TACTTACCGG CGAGAAAAAG
CAACTCACTT CCGGCAAATT CGAGGTGCAG CAGATACAAC TGTCGAAAGA CAAAAAACAC
TTCTACCTGC AAACGAACGA AGTGCACCCC GGCGAGCAGC ATTTTTATCG GATGGCGGTG
AGCGGAGGAG AACGTACGCG CCTGACGAAC ATGACCGGCG CAAACGATGT AACCCTCTCG
CCCGATGAAA CCCGGATGGC CATTCGGTAT TCCTCCAGCA ATCAGCCCTG GGAGTTGTAT
GTGATGGAAA TCAACCAAAC CGGCACTGAC TCTAAAACGG CCAAAGCAGC TACCGCTAAT
CCGGCCATTA AACTGACCAA CTCGCTGACC GACGCCTTCA AAGCCTACCC CTGGCGGGAA
CCTTCGCTGG TAACCATTCC CGCCCGCGAC GGACAGTCGA TCTACGCCCG CTTGTACAAA
CCCGCTACGC CTAATGGAAA GTCGGTGGTT TTTGTACACG GTGCCGGGTA TTTGCAAAAC
GCCCACAAAT GGTGGAGCCA GTATTTTCGG GAGTATATGT TCCATAACCT ACTGGCTGAC
AAAGGCTATA CGGTTCTCGA CATCGACTAC CGCGCCAGTG CTGGCTACGG CCGCGACTGG
CGCACAGGCA TTTACCGCTA TATGGGCGGC AAGGATTTGG AAGACCATGT CGATGCGGCT
AAATGGCTCG TTCAAACGCA GGGTGTCGAT GCCAAACGAA TTGGAATTTA TGGCGGCTCT
TATGGTGGGT TTATTACCCT GATGGCCATG TTTACCACGC CCGATGTTTT CAAAGCCGGG
GCCGCTCTTC GACCCGTAAC CGACTGGGCG GCCTATAACC ATCCGTACAC CGCCAACATC
CTGAACGAAC CCCAAACCGA CTCATTGGCC TATCGGCGTT CCTCACCCAT CAATTTTGCC
GAAGGCCTAA AAGGTCACTT GCTCATCTGT CATGGCATGG TCGATGTAAA CGTTCATTTT
CAGGATGCCG TCCGGCTGGC TCAGCGGCTC ATTGAACTGA AAAAGGAAAA CTGGGAACTG
GCCCCCTACC CCGTTGAAGA CCACGGCTTT GTTGAACCCA CCAGCTGGAT GGATGAATAC
AAGCGAATTT TGAAGCTATT CGACGAGCGA TTATAG
 
Protein sequence
MHRLYALFAL LSSASAVAQS SPQKPTPLTV ETIMQDPKSW VGTSPSNPFW SDDSKTLYFN 
WNPDRTLGDS LYKVTFTSLV PRSGRTRLLA ASQPVKVSPT ERRALPAPPV SAFNLAYTQR
VFDRQGDLFL LDLKFGSVRQ LTNTVEVETD PTFSGDQKQV IFRRSGSNLF SIDLKTGQLT
QLTDFKPGSK KADTKLTDEE KFLKQDQLRL SSVLKERKEK KDEADRISKA DQPKRPKEIY
LDDKTLVNPT LSPDGRFVTY RLMKRPTNAK TAQVPNYITE SGYTEEIAAR TKVGAPVASQ
EFFVYDIAKD TVRAVSVKDI PGITDKPAYL QSTKADTAKK VRPVAISSPV WSEDSKFCVV
VVRSLDNKDR WIMRLQPETL KLSLLDRQHE DTWIGGPGIG SQNSPGSMGF LGDNQTLWFQ
SEADGYSHLY TVNVLTGEKK QLTSGKFEVQ QIQLSKDKKH FYLQTNEVHP GEQHFYRMAV
SGGERTRLTN MTGANDVTLS PDETRMAIRY SSSNQPWELY VMEINQTGTD SKTAKAATAN
PAIKLTNSLT DAFKAYPWRE PSLVTIPARD GQSIYARLYK PATPNGKSVV FVHGAGYLQN
AHKWWSQYFR EYMFHNLLAD KGYTVLDIDY RASAGYGRDW RTGIYRYMGG KDLEDHVDAA
KWLVQTQGVD AKRIGIYGGS YGGFITLMAM FTTPDVFKAG AALRPVTDWA AYNHPYTANI
LNEPQTDSLA YRRSSPINFA EGLKGHLLIC HGMVDVNVHF QDAVRLAQRL IELKKENWEL
APYPVEDHGF VEPTSWMDEY KRILKLFDER L