| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2839 |
|---|
| Symbol | |
|---|
| ID | 8726589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3433536 |
|---|
| End bp | 3434840 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003387652 |
|---|
| Protein GI | 284037722 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAA AACAAGTTTC CCGACGATTC GTCCTCAAGG CGGGGGCGGT CAGTTCGCTG
GCGGCTATCG GTATGCCGAC CTTTGTTCCA GCGCGTGCGT TTGGTGCGAA CGACCGGGTG
CGCGTAGGCG TCATTGGCAT CAACGGCCGC GGTAAAGACC ATATTCAGGG TTTCTCGCGC
CTAAAAGATG TAGAAGTAGC CACACTCTGC GATGTCGACA GTAATGTACT TCAGGCTGGA
GCCGATGCGT TTGAGAAGAA GTACAACAAA AAAGTGAAAA CCCAGGCCGA TCTTCGGCAA
GTCTACGACG ACAAGGACAT CGACGTCGTG AGCATTGCCA CCCCCAACCA CTGGCACGCG
CTGGCGGCTA TCTGGGCGTG TCAGGCGGGT AAAGATGTGT ACGTTGAGAA ACCTGGTGCC
CATAACTTAC GGGAAGGCCG CAAACTGGTC GAAGCCGCTC ACCACTACAA GCGAATTGTG
CAGCACGGGG TGCAGTTGCG GAGTTCCGTC GCTATTCAGG AAGCCATCAA ACACCTGCGC
GACGGACTAA TTGGCAATGT GTATATGGCT CGGGGGCTAG TGTACAAATG GCGTCCAGAT
ATCGGAAATC AGGGCACCTC ACCCGTTCCG GCTGAACTTA ACTGGAACAT GTGGCAGGGT
CCGGCCCAGG CAAAAGAGTT CAGCAAAAAC TACGTCCACT ATAACTGGCA CTGGTTCTGG
GACTACGGCA ACGGCGACAT TGGCAATCAG GGCATTCACG AAACTGACCT CTGCATGTGG
GGTCTGGATG TAGGTCTGCC CGAAGAGATC ACCTCGGCGG GCGGTAAATT CCTCTGGAAA
GACTGCAAAG AAACGCCCGA AACACTCACC TCCGTGTATA AATATCCATC GTCGGGTAAG
GTGATTCAGT TTGAGGTTCG CCCCTGGATG ACTAACAAAG AGGACGGTGT CGAAATCGGC
AATATCTTCT ACGGCGATAA GGGCTACATG GTCATCAACG GCTATTCGGA CTATAAAACG
TTCCTGGGTA AAGAACGGGC TCCCGGTCCG GCGCGCAATG AGGGGGGCGA CCACTACCTG
AACTTCATCG AAGCCGTTCG GGCGCGGGAC ACATCGAAGC AGAACGGCCC CGTCGAAACG
GCGCACCTGG CGTCGGGTAT TGCCCACCTC GGCAACATTG CCTACCGTTT GGGTCGTACC
CTGCATTTCG ACCCAAAAAC CGAAGTGTTT GTTGGTGATA AAGAAGCGAA CCAAATGCTA
ACCCGTAAAT ACCGCGCGCC ATTTGTGGTG CCGGAAAAGG TGTAG
|
|---|
| Protein sequence | MNEKQVSRRF VLKAGAVSSL AAIGMPTFVP ARAFGANDRV RVGVIGINGR GKDHIQGFSR
LKDVEVATLC DVDSNVLQAG ADAFEKKYNK KVKTQADLRQ VYDDKDIDVV SIATPNHWHA
LAAIWACQAG KDVYVEKPGA HNLREGRKLV EAAHHYKRIV QHGVQLRSSV AIQEAIKHLR
DGLIGNVYMA RGLVYKWRPD IGNQGTSPVP AELNWNMWQG PAQAKEFSKN YVHYNWHWFW
DYGNGDIGNQ GIHETDLCMW GLDVGLPEEI TSAGGKFLWK DCKETPETLT SVYKYPSSGK
VIQFEVRPWM TNKEDGVEIG NIFYGDKGYM VINGYSDYKT FLGKERAPGP ARNEGGDHYL
NFIEAVRARD TSKQNGPVET AHLASGIAHL GNIAYRLGRT LHFDPKTEVF VGDKEANQML
TRKYRAPFVV PEKV
|
|---|
| |