| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2838 |
|---|
| Symbol | |
|---|
| ID | 8726588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3432523 |
|---|
| End bp | 3433299 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003387651 |
|---|
| Protein GI | 284037721 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.679351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.63493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACGTC GTCCGGTAGC ATTCATAACA GGGGGTAGCC GTGGAATTGG CTACGGCATT
GCCGAACAAT TGGCCGATGC CGGATTTGAT CTGGCCATTA ACGGTGTTCG GCCAGAAGAT
GCCGTACGGG AGGCTTTGGA CGCACTTCGA AGCCGGGGTA TTGATGTACT TTACTGCCCC
GGTGATATTG CCTCGGGCGA AGCTCGCGCA GACATGATGG CCTCGATCAA CGCTCATTTT
GGACGCCTGA ACGTGCTGGT TAACAATGCG GGCGTAGCGC CTAAAGAACG GCGGGATATT
CTGGAAGCCA CCGAAGAGAG CTTTCACTAT GTACTGTCGA CGAACTTGCA GGGGGCCTAT
TTCCTGACGC AGGCTGCCGC CAACTGGATG ATCGCCCAGC GTACTGAGCA GACCGAATTC
TGGGGTTGCA TCATCAACGT ATCGTCCGTT TCGGCCACGG TGGCGTCAGT GAATCGGGGC
GAATATTGTG TAGCGAAAGC AGGGCTTAGT ATGGCAACCC AGCTCTTTGC CGCCCGACTG
GGAGAATATG ACATTCCGGT TTACGAAGTT CGGCCGGGCG TTATCAAAAC GGATATGACG
GCGGGCGTAA CTGCCAAATA CGACGCCCTG ATTGACAACG GATTGACTGT GCAAAAGCGC
TGGGGAGTGC CCTACGACGT TGGTCGCGCC GTGGCCTCCC TCGCCAAAGG CGATTTCCCT
TACTCCACGG GCCAGGTCAT CCTGGTCGAT GGAGGACTTA CAATACCGAG ACTCTAG
|
|---|
| Protein sequence | MERRPVAFIT GGSRGIGYGI AEQLADAGFD LAINGVRPED AVREALDALR SRGIDVLYCP
GDIASGEARA DMMASINAHF GRLNVLVNNA GVAPKERRDI LEATEESFHY VLSTNLQGAY
FLTQAAANWM IAQRTEQTEF WGCIINVSSV SATVASVNRG EYCVAKAGLS MATQLFAARL
GEYDIPVYEV RPGVIKTDMT AGVTAKYDAL IDNGLTVQKR WGVPYDVGRA VASLAKGDFP
YSTGQVILVD GGLTIPRL
|
|---|
| |