Gene Slin_2836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2836 
Symbol 
ID8726586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3429635 
End bp3431044 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387649 
Protein GI284037719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.643664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.650646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTA ACGATTCTTT ACAACCTACG GACCTTTCAT CAAAACTTGA CCGTTTCTGG 
GCGCTTTCCG GCCAGAAAAT ACAACTGATT GACGACGAAT ACGATGTAAG CAAAGGCTCT
CCCGTTTTTA CGGTACAGGG AAAATACACC ACGCGGGGCT GGACCGAATG GACCCAGGGT
TTCCAGTTTG GGTCAGCGAT TTTACAGTTC GATGCCACAA ATGAAACGAA CTTCCTGGAC
GCAGGTCGCC AGAAAACGCT TTCCGTTATG GCCCCTCACA TCAGCCATAT CGGTGTTCAT
GACCATGGGT TCAACAATGT GAGCACCTAC GGAAATCTGC TTCGCCTGAT GCGCGAAGGC
CGAATCGAAT TCAATGAGTG GGAGAAAAAC CTCTACGAAC TGGCACTCAA GATTTCCGGT
GCCGTACAGG CCAGCCGCTG GACACCCATC AAAAGTGGCC CGGATGGCGC AGCGGGCTTC
ATCAGCTCGT TCAACGGTCC GCATTCGCTG TTTGTCGACA CCATCCGTTC GTGCCGGGCG
CTGGTGCTGA GCCATTCGCT GGGCCACGTT TTTCAGGGCG AAGGCGATGT AAAAATCAAC
CTGCTCGACC GGGCACTTCA GCACATCAAA GCCACCGCCG ATTATTCAGT TTTTTATGGC
GAAGGTCGCG ACTCTTATGA CATATGGGGC CGAACGGCGC ACGAGAGTGT GTTTAATGTG
CGAGATGGCA ACTTTCGCTG CCCCAACTCG CAACAGGGGT ACTCGGGCTT TACCACCTGG
ACCCGTGGCC TTGCCTGGGC CATGTGCGGC TTTCCCGAAC AACTGGAATG GCTCGCCACC
CGCAATGATG CCGAACTGGA TGCCTTTGGC GGGCGGACGT TCATTGAAGC ATACATGCTC
AAAGCAGCCA CGGCCACCTG CGATTTCTAC ATCGACCATA CCCCAACCGA TGGCATCCCC
TATTGGGATA CCGGAGCACC TAACTTACAC CGGCTGGGCG ACTACCTTAA CCGCCCCGCC
GACCCCTACA ATGACTTCGA ACCGGTCGAC AGTTCGGCCG CTGCCATTGG CGCACAAGGG
CTCTTACGAC TAGGGAAATA CCTGATCGCC AAAGGCAATT CTGAATCGGG CAAACGGTAT
TACCAGGCGG GCCTGACCGT GCTGAACACC CTATTTGACG AGCCTTATCT GAGTACTGAC
CCGGCGCATC AGGGCTTACT GCTTCATTCG ATTTACCACC AGCCTAACGG CTGGGATTAT
GTACCGGCAG GCAGTAAGAT TGCCAATGGC GAATCGAGCA TGTGGGGCGA TTACCACGCC
CGTGAAGTAG CTCTCTACCT GCAACGCATT ATCCGTAACG AACCCTACTA CACATTCTTC
AATCGGGTCG CCGAACCGCG GATCGCCTAA
 
Protein sequence
MLINDSLQPT DLSSKLDRFW ALSGQKIQLI DDEYDVSKGS PVFTVQGKYT TRGWTEWTQG 
FQFGSAILQF DATNETNFLD AGRQKTLSVM APHISHIGVH DHGFNNVSTY GNLLRLMREG
RIEFNEWEKN LYELALKISG AVQASRWTPI KSGPDGAAGF ISSFNGPHSL FVDTIRSCRA
LVLSHSLGHV FQGEGDVKIN LLDRALQHIK ATADYSVFYG EGRDSYDIWG RTAHESVFNV
RDGNFRCPNS QQGYSGFTTW TRGLAWAMCG FPEQLEWLAT RNDAELDAFG GRTFIEAYML
KAATATCDFY IDHTPTDGIP YWDTGAPNLH RLGDYLNRPA DPYNDFEPVD SSAAAIGAQG
LLRLGKYLIA KGNSESGKRY YQAGLTVLNT LFDEPYLSTD PAHQGLLLHS IYHQPNGWDY
VPAGSKIANG ESSMWGDYHA REVALYLQRI IRNEPYYTFF NRVAEPRIA