| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2819 |
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| Symbol | |
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| ID | 8726569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3412657 |
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| End bp | 3413973 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003387632 |
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| Protein GI | 284037702 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT TTCGATGGTA TGTGTCTACC GCCCTTTTAC TGGGATGTTC TGTGGTGAAC
GCACAGGACG TTACCCTGGA CCAGCTAATT AATAAAGCAC TGACGGGTAA CTACAGTGTT
CAGGCTACCC GGCTTGATGA AATCAAAACC GATGCGCAAA TTGCGGAGGT ACGAGCCAAT
GCCCGTCCGC AGGTCAACCT CACGGGTGAC TACAAGCGGT ATCTGAAAAT ACCCGGTCAG
GTGGTACCTG CCTCGGCCTT TGGCGGGCCG GAAGGGTCGT ATTCCGTGCT GGCTTTCGGC
TTGCCGTATA ATCTCTCAAC CAGTGTTCAG GCATCGCAGG CCTTGTATAA TCAGTCGCTG
ATGATTGCGA CGAAAGTGGC GAAAACCAGT CGTGATTTGT CGGCCCTGCA AACGCAGAAG
ACCAAAGAAG ACGTAGCCTA CAACGTATCA GCTACGTACT ATAACCTCCA GACCACAGCT
CAACAGATTG CCTTCCTTCA GAAAAATCTC GCTTCCACCG AGCGACTTAT CCAGATTACG
GACCTCCTTC GGCAAAACAA ACTGGCTAAG GGAATTGATG TAGATCGCTT ACTACTGAGT
AAAACATCGT CACAAACGCA GATTGAATCG CTTCAGGCGA CGTATAATCA ACTGCTGAAT
ACGCTGAAAC TGCTGACGGG TATTCCTCAA ACCGACTCGC TCACCGTTCG AACGGCCATC
GACGAGACGG TTCCCGTAAC GCCCGCCAAC GAATACACCA TCAACCGCAC CGACCTGCAA
TTGCTTGACC GCCAGAAAGA CCTGAACGGG CTTGAACAGC GCAACATTAA AGCGGGGTTT
GTGCCAACTG TCTCGGCCTA TGGTCTGGCA AACAGCACGG TATACGCGAC GGGTGGCGAC
AATTCTTACA TCAAAAATGT ACCTGGCTAC TGGCTGGGTC TGCAACTGAA CTGGAATGTG
TTCGATGGCA TGGCCCGTAA GGCAAAACTG AGCCAGAAGC GTATCGACGA TCAGAAACTG
GACGTACAGC TTCGCCAGAC ACGCGAGTCG ATAGCTATGG ATATTGCCAA TTCCCGGAAT
CAGTTTCTGG TACAGCAGCG GAATCTGGCT ACCAACCGGG GGCAAGTGGC CCTGGCCGAA
AAGGTGTACA CCCAAACACA ACTGCAATTT AAAGAAGGCA CGGTCGATAT TACCGACGTG
GTGCAGGCCG AAAACTCCCT CCGCGAAGCA CAAAATAATT TCCTCAATAC GCTGGTCAGC
CTCCGCACCG CCGAACTGGA CTGGAAAAAA GCAACCGGAA GCTTAATCAA CCAATAA
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| Protein sequence | MKIFRWYVST ALLLGCSVVN AQDVTLDQLI NKALTGNYSV QATRLDEIKT DAQIAEVRAN
ARPQVNLTGD YKRYLKIPGQ VVPASAFGGP EGSYSVLAFG LPYNLSTSVQ ASQALYNQSL
MIATKVAKTS RDLSALQTQK TKEDVAYNVS ATYYNLQTTA QQIAFLQKNL ASTERLIQIT
DLLRQNKLAK GIDVDRLLLS KTSSQTQIES LQATYNQLLN TLKLLTGIPQ TDSLTVRTAI
DETVPVTPAN EYTINRTDLQ LLDRQKDLNG LEQRNIKAGF VPTVSAYGLA NSTVYATGGD
NSYIKNVPGY WLGLQLNWNV FDGMARKAKL SQKRIDDQKL DVQLRQTRES IAMDIANSRN
QFLVQQRNLA TNRGQVALAE KVYTQTQLQF KEGTVDITDV VQAENSLREA QNNFLNTLVS
LRTAELDWKK ATGSLINQ
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