Gene Slin_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2817 
Symbol 
ID8726567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3408406 
End bp3411567 
Gene Length3162 bp 
Protein Length1053 aa 
Translation table11 
GC content54% 
IMG OID 
Productacriflavin resistance protein 
Protein accessionYP_003387630 
Protein GI284037700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTG TCGAAACCAT CATAAAACGC CCCTCGCTCA TTATCGTGTT GTTTGCGATA 
CTGACCATTG GTGGCCTGTT TTCGTATCGG TTGCTGAGTT ATGAGTTGCT GCCGGAATTC
TCAACGCCGG TTATCACTAT AACGACCATT TATCCGGGTG CCGCTCCGTC GGAAGTGGAA
ACGGAGATTA GTAAAAAGAT TGAAGATGCC GTTTCGGGTC TGGATAACCT GGATGATGTA
AAGTCCAACT CCTTCGAGAA CGCATCGGTA CTTGTGGTTC AGTTCAAAGC CGGAACCGAT
ATTGACCTGG CCTTGCAGGA CGCCCAGCGG GAAATTGATA AAATGGTGAG CGATCTGCCC
GACGATGCTG AACAGCCGTC ATTGTCGAAG ATATCGCCCA GTGACCAGCC CATCATGCAG
TTGCTGGCAA CCTCTACGCT GCCCAACGAA GTGTTCTATC AGCAGGTTGA AGATAAGTAT
CTGCCCGTTC TTCAGCAGAT TAAAGGCGTC GCCGATATTG CGATGGTGGG GGGCGACAAG
CGCGAGATTC GTATCAACGT CGATGATGAC AAACTGAATT ACTATGGCTT GTCATTGCTT
CAGGTGTCGC AGGCTATTAA CCAGGCTAAT CTCGATTTTC CGACCGGGAA AGTGAAAAGC
ACGAGCGAGA ACATGACGCT CCGGCTGGCG GGTAAATTCA GCTCGCTGGA CGACATTCGC
AAGCTGGTCA TTGCGACACC GGCCAACGGC AGCCCCATTC GCATAAGCGA CGTAGCAAAC
GTAACCGACG GATTGACGGA AGCCACCAGT ATCAGCCGTT TCAACGGGCA GGATGGTATT
GGGTTGTTCA TCAAAAAACA GTCGGATGCC AACGCAGTGG AAATAAGCCG GATCGTGCAG
GAAAAGTTGG CGCAGATTGA AAAAGAGAAC ACCAAAGACA AGGTTCACTT CGCCATTGCC
TACGACAGCA GCGTATTCAC GTTGGCCTCT GTCGAAGCCG TAACCCACGA TTTGCTGCTG
GCCGTCGGTC TGGTAGCCAT TGTGATGCTG CTGTTCCTGC ACAGCTTCCG AAATGCGTTC
ATCGTCATGA TTTCGGTACC GGCTTCGCTG ATTTCGGCCT TCCTGTTCAT GTTTGTGATG
GGCTACTCGC TCAACCTTAT GACTCTGCTG GCCCTCTCGC TGGTGATCGG TATTCTGGTC
GATGACTCGA TTGTGGTGCT CGAAAACATC CAGCGACATT TGGAGATGGG CAAAGACCGC
TGGCGGGCTA CCCTCGACGG TGTGAGTGAA ATTGGCTTTG CGGCCGTGGC CATTACGCTG
GTGATTGTGG TGGTTTTCGT GCCGATCACC TTTGTGAATT CGGTCATCGC CGACCTGTTG
CGCCAGTTCT CGCTCACGGT GGCGTTTGCC ACGATGGTCA GTTTAGTCGT TAGTTTCACA
CTGACTCCCT GGCTAACGTC GAAGATGGCC CGGCTGGAAC ATCTGAATCC GAAAAATCCA
TTCCAGGCCT TTTTACTCTG GTTCGAAAAA GGACTGACAG CGCTAACCAG CGTCTATCAC
CGCAGTTTGG GCTGGGTATT AACACATAAG CTGGCGTTTA CCGGCATACT GGTGGCTATT
TTCGTGTTCA CCGGCTGGGT TATGAACCTG GGTATTATTG GTTCGGAGTT CGTGGCGCAG
GGCGATCAGG GTAAGTTTCT GCTCACGATG AAACTTGACA AAAGTGCGTC CCTTCAGCAA
AACAACCTGA TGGCGCGGAA CATCGAAAAC TACCTGCGGA AGAAACCGGA AGTCGAAACG
ATTTTCGCCA ACGTAGGTGG AGCCAGTACC GGCATGAACA GTACCGGCCA GGGCGAAACC
AACCGGACGG AGCTAACCGT TCAACTCGCC GATGCCAGCG AACGCCCCGG CCACAAACTC
ACCGAGCAGT ACATGATCGA CGTTCGGCAG GAGCTTGAGA AACAGTTTCC GGCCATCGAG
TTCAATTCCT CAGTGGTGGG GATGGTCAAC TCCGGTTCGG CACCGATCGA GATATTCCTG
AGCGGCAATA ACGTAAGCCA GAACTTGGCC GCTGCCGAAG AACTTGCCAA TCGAATCCGC
AGAACACCCG GTGCCAACGA CGTAAACGTA TCCGTTGAGT CGGGTAACCC CGAAGTTCGG
GTCGATATCG ACCGCGAGAA AATGGCGAAG CTGGGCTTGA CGATTCAGAC CGTTGGCGGC
ACGCTGCAAA ATGCCTTTGC CGGAAACGAC GACTCCAAGT TCCGCGATGG GGGCGAGGAC
TACGACATCC GGGTGATGCT CGATGCCTTC GACCGGAAGA ACCCCGACGA TGTGAAGAAC
ATCAACTTTT TCAGCCCCTC TACCAACCGT CCGGTGCGGC TGGCCGAGTT CGCCAACGTT
ACCCTGAGCA ACGGGCCGTC GCTGCTGGAA CGGAAAAACC GCCGGTCGTC TGTAACGGTA
ACGGCCAACA CGCTGGGTAC GGGCTCGGGT ACGCTGACCA GTGTGATTCA GGCCGATCTG
GCCAAAAATC CGCTGCCTGC GGGTGTAACG GTGAGCTGGG GTGGCGATGC CAAGAACCAG
AGTGAAGGCT TCGGGTCGCT GGGTATTGCC ATGCTGGCCG GTCTGATGCT CGTGTACTTC
ATTATGGTGC TGCTCTACGA CAGTTTTGTC TATCCGTTTG TGGTACTCTT TTCAGTGCCG
GTTGCGGTCA TTGGTGCCTT GCTGGCGCTG GCGTTGACCT CCTCGAACAT CGGTATTTTC
GCCATGCTGG GTATGCTAAT GCTCATTGGT TTGGTCGTGA AAAACGCCAT CCTGATTGTC
GACTTTGCCA ATCAGCAGAA AGAGCAGGGC GTTCCGTTCC GGCAGGCCAT CCTTCACGCG
GGCGAAGAAC GACTTCGTCC AATTCTGATG ACGACCATTG CCATGGTGAT CGGGATGATT
CCGATTGCAA CGGCATCGGG AGCCGGTGCC GAGTGGAAAA ACTCGCTGGC CTGGGTGCTG
ATTGGTGGCC TGAGCAGTTC CATGCTGCTG ACCATTTACC TCGTTCCTAT GATGTATTAT
GTCGTGGACC GGATAGGGGA GAAGTGGACA GTCTTTCGGT CGAAAAAGCA GATCGACCAG
CCCGTTCAGG CCGAGCCAAT TCAGACCGAA CCAATTCATT AG
 
Protein sequence
MKFVETIIKR PSLIIVLFAI LTIGGLFSYR LLSYELLPEF STPVITITTI YPGAAPSEVE 
TEISKKIEDA VSGLDNLDDV KSNSFENASV LVVQFKAGTD IDLALQDAQR EIDKMVSDLP
DDAEQPSLSK ISPSDQPIMQ LLATSTLPNE VFYQQVEDKY LPVLQQIKGV ADIAMVGGDK
REIRINVDDD KLNYYGLSLL QVSQAINQAN LDFPTGKVKS TSENMTLRLA GKFSSLDDIR
KLVIATPANG SPIRISDVAN VTDGLTEATS ISRFNGQDGI GLFIKKQSDA NAVEISRIVQ
EKLAQIEKEN TKDKVHFAIA YDSSVFTLAS VEAVTHDLLL AVGLVAIVML LFLHSFRNAF
IVMISVPASL ISAFLFMFVM GYSLNLMTLL ALSLVIGILV DDSIVVLENI QRHLEMGKDR
WRATLDGVSE IGFAAVAITL VIVVVFVPIT FVNSVIADLL RQFSLTVAFA TMVSLVVSFT
LTPWLTSKMA RLEHLNPKNP FQAFLLWFEK GLTALTSVYH RSLGWVLTHK LAFTGILVAI
FVFTGWVMNL GIIGSEFVAQ GDQGKFLLTM KLDKSASLQQ NNLMARNIEN YLRKKPEVET
IFANVGGAST GMNSTGQGET NRTELTVQLA DASERPGHKL TEQYMIDVRQ ELEKQFPAIE
FNSSVVGMVN SGSAPIEIFL SGNNVSQNLA AAEELANRIR RTPGANDVNV SVESGNPEVR
VDIDREKMAK LGLTIQTVGG TLQNAFAGND DSKFRDGGED YDIRVMLDAF DRKNPDDVKN
INFFSPSTNR PVRLAEFANV TLSNGPSLLE RKNRRSSVTV TANTLGTGSG TLTSVIQADL
AKNPLPAGVT VSWGGDAKNQ SEGFGSLGIA MLAGLMLVYF IMVLLYDSFV YPFVVLFSVP
VAVIGALLAL ALTSSNIGIF AMLGMLMLIG LVVKNAILIV DFANQQKEQG VPFRQAILHA
GEERLRPILM TTIAMVIGMI PIATASGAGA EWKNSLAWVL IGGLSSSMLL TIYLVPMMYY
VVDRIGEKWT VFRSKKQIDQ PVQAEPIQTE PIH