| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2802 |
|---|
| Symbol | |
|---|
| ID | 8726552 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3390319 |
|---|
| End bp | 3391170 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
|---|
| Protein accession | YP_003387616 |
|---|
| Protein GI | 284037686 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGA AAATCGTTCG CGTTGGCGAC ATTGAATGCG GTTCCGATGA GTTGTTTCTC
ATCAGCGGTC CCTGCGTTAT TGAAGATGAA AAAATTATGA TGACGGTGGC TGAGCAGCTC
CGCGAAATTC AGGAACGGCT CGGCATCAAG ATCATCTACA AGTCGTCGTT CCAGAAGGAC
AACCGCTCCA GCCTGAACTA CTACAACGGT CCGGGCCTTG AGAAAGGCAT CAAGATTTTG
GCTAAAGTAA AAGAGCAGTT CGGTTTTCCG CTGCTCACCG ACGTGCATTA CCCGGATCAG
TGCGCTCCTG CTGCCGAAGT GGTCGACGTG CTGCAAATTC CGGCCTACCT GTGTATGCAG
ACGATGCTCG TAGTGGCAGC CGCCCAAACG GGTAAGGTTG TTAATGTGAA GCACGGGCAG
TTTCTGGCAC CGGAAAACAT GAAGCACCCG GTCAAAAAGA TTGAAGATTC GGGCAACGAA
CAAATCATCC TGACCGAGCG TGGTTTCACC TTTGGGTACA ATGACCTGGT GGTTGATCCA
CGCGCTTTCT ACCACATGGC GCGTACTAAC TACCCCGTCG TGTTCGACGT TACCCACGCT
ATCCGGAAGT ACGGTATTCC ATCGGCCGAT GCGAAAGGTG GAGCGCGGGA ATATCTGCCC
GTATTAGCCC GCGCCGGTGT GGCTGCCGGT GTCGATGGCC TGTTTGTGGA AACGCACACC
TGCCCATCCG AAGCCCTTTG CGATGCCGCC AGCCAACTGG ACATCCGGTA TCTGGAAGAG
TTCATGAAGC CCCTCATCGA ACTCCACGCG GTTGAGGTAA AATACCGCAA CACATTACCG
GAATTGGCTT AA
|
|---|
| Protein sequence | MSQKIVRVGD IECGSDELFL ISGPCVIEDE KIMMTVAEQL REIQERLGIK IIYKSSFQKD
NRSSLNYYNG PGLEKGIKIL AKVKEQFGFP LLTDVHYPDQ CAPAAEVVDV LQIPAYLCMQ
TMLVVAAAQT GKVVNVKHGQ FLAPENMKHP VKKIEDSGNE QIILTERGFT FGYNDLVVDP
RAFYHMARTN YPVVFDVTHA IRKYGIPSAD AKGGAREYLP VLARAGVAAG VDGLFVETHT
CPSEALCDAA SQLDIRYLEE FMKPLIELHA VEVKYRNTLP ELA
|
|---|
| |