Gene Slin_2799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2799 
Symbol 
ID8726549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3387975 
End bp3388637 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content56% 
IMG OID 
Productthiamine pyrophosphokinase 
Protein accessionYP_003387613 
Protein GI284037683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAC ATCACATTGT CCGCGAAAAG CAGGAACCGG CCCTCTTGAT TGCCAACGGC 
GAAGCCTGCA GTGCCGAGTT GCTGGGGCAG CTTCTGGAGT GGAGCCCCAC GGTGGTCGTG
CTCGATAGCG CCATCTGGCG GGTGCTCGAT CTGGGTATCA AAGTCGATGT GCTGCTGGGT
GACTTCGACC GTGATCTGGA CCTGGACGCT ATTCGCGAGC AGCAATACCC GCTGGAAATC
GTTCATACGC CCAATCAGGA TAAAACCGAT CTCGATAAAG GCATCGAATA CCTGATCGAG
CGGGGCTATC CGGCAGTCAA CATCGTTTGG GCCACCGGTC GGCGGGCAGA CCACAGCCTG
ACCAACATGA CCAACATTGT GCGGTATAAA GACCAGATTC GCATCGTGAT GATCGACGAC
CACTCGAAGA TTTTTCCGCT GGTCGGGCGG TTCGAGAAAT GGTACGAAGC CGGAACGCCC
ATTTCCCTGA TTCCCGTCGG TACTGTAACG GGTTACACTT CGGCGGGGCT CAAGTACGAT
CTTCAGGATG CCACGCTCAC CCTCGGCTAT AATACCAGCA GCAGCAATGA AGCCGCGCAG
GACGGTTTTG TTCGTGTTGA AACCCAATCC GGCGATCTGC TCATTATGGA GTGCTGGGAT
TAG
 
Protein sequence
MSSHHIVREK QEPALLIANG EACSAELLGQ LLEWSPTVVV LDSAIWRVLD LGIKVDVLLG 
DFDRDLDLDA IREQQYPLEI VHTPNQDKTD LDKGIEYLIE RGYPAVNIVW ATGRRADHSL
TNMTNIVRYK DQIRIVMIDD HSKIFPLVGR FEKWYEAGTP ISLIPVGTVT GYTSAGLKYD
LQDATLTLGY NTSSSNEAAQ DGFVRVETQS GDLLIMECWD