Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2794 |
Symbol | |
ID | 8726544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3376829 |
End bp | 3379132 |
Gene Length | 2304 bp |
Protein Length | 767 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003387608 |
Protein GI | 284037678 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.470571 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTGCC CTCAACAGCC TGCTGATACG CCTGTTAAGC TGACCCAGCG ACTTGATCAT GACTTTGCCC TCCAGGCAGC CGGTCTGGGC GTCTGGGAGT TTGACCCCCT CACTAAACAA GTTCTCTGGG ATGACCGATG CCGTCAGTTA TTTGGCCTGG CTAAAGACAA TCAGCTACCC TATGAGCAAG CCATCCAGTA TATCCATCCC GACGATCAGG TCCGCGTGGA TCAGGCCGTT CAACAGGCGC TCTCGGGTCA GTCGAACGGG CAGTATGATG TGACCTTTCG AACAGTGGGG GCCGATGATG GCCTGCTCCG GTGGGTTCGG TTCATGGGTA GGGCCGAGTT GACCCCCGCC GGGCAGGTCC ACCGGTTTGG GGGCGTGGCA CAGGAGGTCA CCCCACAGGT GCTGGCTCAC CATCGGCAGG CTCAAGAGAC CCAAGAGGCT CAGGACGCTT TGCAGGGCGT GCTGGCCATT GCCGATACGG GCACCTGGAC CCTGGATGTG GCTACGGGCC TGATTTCGTA TTCGCAGCGG CTCAAAGAAC TCTTCGAATT TACCGATGAT ACCATCGGGA TGGACCGCGT CTATAATCCC ATTCTTGACG CTGATCAACT GCGGGTGGCT CAGGCGGTGA ACCGAGCCCT TGACCCGGCC CTTGATGGTT ACCTGGATGA AGAGTATACG ATCGTGACCC AGCGCACGGG GCGACACCGG ATTGTTCGGG CCCAGGCCAA ACTGTATGTC GATGAGCAGG GGCGGGCCAA CAAGCTCCAG GGCAGCATGC GCGACGTGAC GCAGGAGCGG CATACGCAGC TGGCCCTGGA GCAGCAGGTG CAGGCCCGCA CCCATGACCT AAATAAGGCC AATCAAGAAC TCTCGGCCAG TAATCAGAAC CTGACACTGG CCCAACAACA ACTACAGGCC AGTCGAGCAC AATTGCAGGC GGTTATTGAT AATGTACCGG TAGCCATTGG CTTGTATGTG GGCCGCGATC TGGTGTTGCA GGCCTATAAT CAAACCCTGA TGGAAGTGGC GGGTAAAGGC CCCAATATTG GGGGTAAACC CATGCGCGAG TTCATGGCCG AGTTTGAAGA CCAGGCGTAT CTGGACCTTA TGGACTCTAT CTATACCAGC CAGCAACCCT TTCGCAGCGT AGACTCGCCG GTTCGTATCG TGCGCAATGG CATTAGCTAC AACGAGTTTT ATAACCTGAA TCACGTTCCG CTGCTGGATG AGACCGGCCA GACGTATGCC ATCCTGGGTA CAGCGGTCAA TGTCACCGAG CAGGTCAGGA GCCGGCAAGC GATTGAAGAG AGTGAGACTC GTTACCGGCT TTTGTCCACT CAATTAGAAG CACTGGTGCA GGAACGAACC CAGGAACTGA TGGCCAGTGA AGCCCGCTAC CGTCGATTAG CTGAGCAGCT GGAAGTGCAG GTGCAGGAAC GCACCGAACA ATTGGCCGCT AGCAATGAAG AACTGGCCGC CACGAATGAA GAATTAACGG CGACCAACGA AGATTTTGTG GCTAGCAACC AGGCCCTGGA AGGCGCCAAC CATGACCTGT TACGCTCCAA TCAGAACCTG GAGCAGTTCG CCTACGTGGC TTCCCATGAC TTGCAGGAAC CGCTTCGCAA AATTCAGCAG TTCGGTGATC TGCTCAAGAG TCAATACGGG GACAGGCTGG ACGATGGAAT TGCTTACTTA GAGCGCATGC AGACCGCAGC CACTCGCATG TCGGTGTTGA TTAAAGACTT GTTAGCCTTC TCACGGATCT CCACGACGCA GGTGATTGCT CAACCTGTGG CGCTCAATCA GGTTGTCAAC CGGGTGTTAG ATACTTTATC GGTTGTGATG GAGGAAAGTG GCGCGCAGGT GGAGGTGACT CGTTTGCCGG TGGTGCCGGG AGATCACTCC CAGTTGGACC AACTGTTTCA GAACCTGTTG TCAAACGCCT TTAAGTTTCG GCGTACCAAC CCAGCCGGAG AACTGGTTAC CCCTCAAATC CGGGTGAAGG CCAGTCTAGT TGCCGAAAGC GAACTACCCC CTTCGTTACA CCCTTCGCGG TATGCCCAAA CCTATCACTG CATTGAGGTA GCTGACAACG GCATTGGCTT TGAGGAGAAG TATTTGGACC GCATGTTTCA GGTGTTTCAG CGGTTGCACG GCAAGAACGA ATATGCGGGT ACGGGTATAG GGTTGGCCAT TGTGCAGAAG GTGGTGACCA ATCATGGGGG GGCCATCACC GCTACGAGTG AGCCAGGCCA GGGCGCTACC TTCTTGGTGT ACTTGCCAGC CTAG
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Protein sequence | MSCPQQPADT PVKLTQRLDH DFALQAAGLG VWEFDPLTKQ VLWDDRCRQL FGLAKDNQLP YEQAIQYIHP DDQVRVDQAV QQALSGQSNG QYDVTFRTVG ADDGLLRWVR FMGRAELTPA GQVHRFGGVA QEVTPQVLAH HRQAQETQEA QDALQGVLAI ADTGTWTLDV ATGLISYSQR LKELFEFTDD TIGMDRVYNP ILDADQLRVA QAVNRALDPA LDGYLDEEYT IVTQRTGRHR IVRAQAKLYV DEQGRANKLQ GSMRDVTQER HTQLALEQQV QARTHDLNKA NQELSASNQN LTLAQQQLQA SRAQLQAVID NVPVAIGLYV GRDLVLQAYN QTLMEVAGKG PNIGGKPMRE FMAEFEDQAY LDLMDSIYTS QQPFRSVDSP VRIVRNGISY NEFYNLNHVP LLDETGQTYA ILGTAVNVTE QVRSRQAIEE SETRYRLLST QLEALVQERT QELMASEARY RRLAEQLEVQ VQERTEQLAA SNEELAATNE ELTATNEDFV ASNQALEGAN HDLLRSNQNL EQFAYVASHD LQEPLRKIQQ FGDLLKSQYG DRLDDGIAYL ERMQTAATRM SVLIKDLLAF SRISTTQVIA QPVALNQVVN RVLDTLSVVM EESGAQVEVT RLPVVPGDHS QLDQLFQNLL SNAFKFRRTN PAGELVTPQI RVKASLVAES ELPPSLHPSR YAQTYHCIEV ADNGIGFEEK YLDRMFQVFQ RLHGKNEYAG TGIGLAIVQK VVTNHGGAIT ATSEPGQGAT FLVYLPA
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