Gene Slin_2783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2783 
Symbol 
ID8726533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3360313 
End bp3361980 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content50% 
IMG OID 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_003387597 
Protein GI284037667 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.1109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCG CCTTGATTAC GTTTGCTGTG ACTTCCCTAT GTTTACTAGC TATTAGAAGC 
CACGCCCAAA ATCAGCCTGA TCAATGGCAT CATCTTGATC CAACCACCGA TAAACTTATT
GGAATCAGTA CTCAGCAGGC CTATCAACTG CTTAGCAACC TACCCCACAA GCCCACTCAA
CCGATCATTG TGGCCGTCAT CGATGGGGGG ATTGACACCA ACCACGACGA TTTGAAAGCC
ATCCTGTGGC ATAATCCTAA AGAAATTGCC GACAATCATA AAGACGATGA TGGCAATGGC
TATACCGACG ATGTATTCGG CTGGAACTTC ATGGGTAACC CTGATGGACG CAACTACGTC
CATGATCAAA AAGAAGAAAC CCGTTTATAT GCTCGCTTGA AGCCCCTTTA TGAGGGCAAA
AATAGAGAGA ACCTGCCTCC ACGTCAACTG GCTGACTATA CTTTATGGGC TCGAGTCAAA
CCTTATTTTG AGCGCAAACG AGCCGAAGCC CAAACCAACT ACCGACAAGA CTCGCTATAC
TTAGCCGAGG ATCTGGCAAA TGTCCAGACG CTCAAGAAAG CATTTGGTGT GAGCCGGTTG
GATTCGGCCT TATTGCATAG CCCACCCACC ACCGACACGA CCCTACACAA ACTAGCAGGG
CGTTATTATC GTGGACTCAC CCAGATGAAA CTGGGTACTA CTGACAGTCT GCTAGCCCGT
TATACACGAT ACAATGCCGA ATTGAAAGCG CGGGTTGATT ATGCCTACAA TTTGGAGGCT
AACGAACGGG CCCTGGTAGG CGACAAAGCC GGGGAGTTCT CTCAACGCCA TTACGGAAAT
GCCAACTTAA CAAGTCCCCT GGATGGTCAT GGCACCTTTC ATGGTTCCCA CGTGGCAGGT
ATTATCGCTG CTGACCGTAC CAACAAACTG GGTGTCAACG GTATTGCCGA CCAGGTCCGT
ATTCTGTCGG TACGTTGTAT TCCCGATGGC GACGAACGGG ACAAAGACGT GGCCAATGCC
ATTCGCTATG CCGTGGACAA TGGCGCTCAG ATTATTAACA TGAGTTTTGG TAAGTATTTC
TCGCCTGATA AAGCCTTGGT GGATGAAGCC ATGCGGTATG CGGATAAGAA AGGTGTCTTG
CTGGTTCATG CGGCTGGCAA TGATCACCTG AACCTAGACT CGACGATGGA GTATCCTTCA
CCGATGTACT TAAACAGCCA ACCCATAGCC AACCTCATTA CAGTGGGAGC CAGTGGTCGA
ACAGATGATA GCAGTTTAGT GGCTGGGTTT TCAAACTATA GTTCGAGCAT GGTAGACGTC
TTTGCTCCCG GTTTTGACAT CTGGTCCTGT GGTCCGGCCA ATACATACAG GCCAGCCAGT
GGCACCAGCA TGGCTACTCC AATGGTGGCG GGCATTGCCG CCGTTCTGAA AACCTATTTT
CCGGGGCTTC GGGCCGCTGA CTTGAAGCGC ATCATCCTGC AGTCGGCCGT GGTGTATCAT
ACGCCGGTGC TGAAACCAGG TACCAAGCAG AAAGTCGATT TTGCCAGCTT GTCTAAAACG
GGAGCCATTG TCAATCTGTA TGAAGCCGTC AAGCTGGCGC TGAGCGAGGC TCAAAAAAAT
AAGGGGATGA CTCGACGAAG GCTACAAGCT AAGTTTGACA AATATTAA
 
Protein sequence
MKPALITFAV TSLCLLAIRS HAQNQPDQWH HLDPTTDKLI GISTQQAYQL LSNLPHKPTQ 
PIIVAVIDGG IDTNHDDLKA ILWHNPKEIA DNHKDDDGNG YTDDVFGWNF MGNPDGRNYV
HDQKEETRLY ARLKPLYEGK NRENLPPRQL ADYTLWARVK PYFERKRAEA QTNYRQDSLY
LAEDLANVQT LKKAFGVSRL DSALLHSPPT TDTTLHKLAG RYYRGLTQMK LGTTDSLLAR
YTRYNAELKA RVDYAYNLEA NERALVGDKA GEFSQRHYGN ANLTSPLDGH GTFHGSHVAG
IIAADRTNKL GVNGIADQVR ILSVRCIPDG DERDKDVANA IRYAVDNGAQ IINMSFGKYF
SPDKALVDEA MRYADKKGVL LVHAAGNDHL NLDSTMEYPS PMYLNSQPIA NLITVGASGR
TDDSSLVAGF SNYSSSMVDV FAPGFDIWSC GPANTYRPAS GTSMATPMVA GIAAVLKTYF
PGLRAADLKR IILQSAVVYH TPVLKPGTKQ KVDFASLSKT GAIVNLYEAV KLALSEAQKN
KGMTRRRLQA KFDKY