Gene Slin_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2778 
Symbol 
ID8726528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3353908 
End bp3355050 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content59% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003387592 
Protein GI284037662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.701087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA CCCTTTCGCT TCTCGCGCTG ACGGGCCTGC TGGCCTGTGA ACAACTCGAC 
GTACCGCAGG CGCAAACCCA GCCCTGCACC CCGAACGCCT ACGCCACGCA TCCGAAAAAC
GGGACGTACC TGACCGAATT GCAGCAATAC CGTCAACGTA CCGGCTCGCC GGGTAGTTTG
CTGCTGATTC AACGGCCCGG CGAAAGCCTG TGGGTGGGTG CGGTAGGCAA ATCCAACCTC
GAACACCAGA CCGACCTGCG TGTCTGCGAT CCCTTCCGGG TGGGCAGCAT CACCAAGATA
TTCACCAGTG TGGCCGTGCT GAAACTCCAG GAAAAGGGGC AAATTCGCCT GACCGATAAC
CTGGCCCAAC TACTGCCTAA AACGGCGGGC CGCATTCCCC GGGCCGACCA GATTACCGTC
CGGCAACTGC TTAACCACAC CAGCGGCATC GTGGACCCAC CCAACGGTAG TCTGCGCTAC
CAGTTGAGCA TCGTCAGCGA CTACCAGGCG CGGTTTACTA TGACCATTGA CGACCTGCTG
ACTGAGTACG TCTATGGCAA ACCACTTCAC TTTTCGCCCG GTACGCAGTT TCGCTACAGC
AACGCGGGTT TCTGGCTGCT GGGGCAGATT GTGGAGCAAA AAACCGGCAA ACACCTGCAC
GAGGTGTTCA ACGAGTGGAT TTTCCGACCG CTGGCCCTGA CCGACACATA CCTGGAGGTA
CGCAACGACC GCAACGTCGT GCGCGGCTAC GCTGACCTCT ACGGCAATGG GCGGTTGTTC
GACGTGAGTC ACTGGGACCG CTCCGACAGC GATGGCGAAG CCGACGGCGG CATTATCTCG
ACGGCTGCTG ACATTGCCCG GTTCATGGAA GGGCTGTTCA GCGGTAAACT CCTAACGCCC
CTGTCGCTGG CCGACATGAT GGCGACCACG CGGCTACCCA GTTGCCCTAA CGGGGACTGC
GAATACGGGC TGGGGCTGGA AAACTGGAAA ACCGAACTGG GTACGGCCTA TGGCCACAAC
GGCGGTTCGG TCGGGTTCGA GGCCAACGCG TTGTATTTTC CGCACAACCG GGGCGTATTC
GTCCTCTACA AAAACAACGG TAACGGCTCC GACAAGAGCC TGATGAATCG GTTGATGAAA
TGA
 
Protein sequence
MKTTLSLLAL TGLLACEQLD VPQAQTQPCT PNAYATHPKN GTYLTELQQY RQRTGSPGSL 
LLIQRPGESL WVGAVGKSNL EHQTDLRVCD PFRVGSITKI FTSVAVLKLQ EKGQIRLTDN
LAQLLPKTAG RIPRADQITV RQLLNHTSGI VDPPNGSLRY QLSIVSDYQA RFTMTIDDLL
TEYVYGKPLH FSPGTQFRYS NAGFWLLGQI VEQKTGKHLH EVFNEWIFRP LALTDTYLEV
RNDRNVVRGY ADLYGNGRLF DVSHWDRSDS DGEADGGIIS TAADIARFME GLFSGKLLTP
LSLADMMATT RLPSCPNGDC EYGLGLENWK TELGTAYGHN GGSVGFEANA LYFPHNRGVF
VLYKNNGNGS DKSLMNRLMK