Gene Slin_2776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2776 
Symbol 
ID8726526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3352135 
End bp3353166 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content57% 
IMG OID 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_003387590 
Protein GI284037660 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.647041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACC TGAACGACAA GGCACTACGC ATCATCGGCC CGCTGGCGTT ATGGGCCGTC 
GGGACGGTAT TTTTCAACCT GAATGTGCTG GTCGATGCCC CCGTCAGCCG CTGGCGGTTC
GTAACGTTCG GTATTTTTAC GCTCTATCTG TCGTGGTTTA CCATTCGGAC ACTGGTTATA
CAGGCGCAGC GACAATACCC TGGGCTGGAA CGTACCCGGC AGCGCATCAT CTGGCTGGCG
GTGTTAAGCT TGCCCGCCAC CGCCGGGCTG GTGCTGGTGC GGCTGCTGCT AACGATCTAC
TACCTGTTCG CGGGTCATAC CCGGCCCGAC CTCGGCGACC CCTTGTTCAT GTTCGGCATC
GGCTTGTTCT ACGCGACCAT CATCGGAGCC ATCTATGAAG CCCGGTATTT TTTCTGGCAG
TGGCTGGTCG AAAAACGCGC ATCGGAGGAA CTGCGCCGGG CGAAGCTCGA AATGCAGCTT
AATTCGCTGA AAGGGCAGGT GCAGCCGCAT TTTCTGTTCA ACAGCCTAAA CAGCTTACAG
GCGTTGGTGA AAGCCCAGGA AACCGACAAA GCCGTGCGGT TTATCGGCGA TCTGGCGCAG
GTGTATCGGT ATTTGCTGCA AAGCAACGAG CAGACGCTTA TCTCGCTCGA TGATGAGCTG
ACCTTTACCC ACGCTTACCT GGGCCTCCTG AAAACGCGCT TCGATGAGGG TTTGCAGCTC
GAGGTAGCCA TCGACCCAGC GTACCGCAGC TATCGCCTGC CCCCGCTGAC GCTGCAACTG
CTGGTCGAAA ACGCGGTGAA GCACAACATC GTCTCGGCGA GCCGCCCGCT CACGATTCGG
CTGTACAGTA ACGGCCATCA AACGCTGGTA GTCGAAAATA ACCTGCAACG CCGGCCCCGC
TCCGACGTTG CATCCGACAA AAAAGGGCTG CTGACCATTA GCCAGAAGTA CCGACTGCTG
GGCCAGCCCG ATATCGACAT TCAGGAAACC GAACAGGCAT TTATGGTAAC GGTGCCGCTT
ATAGGATGCT GA
 
Protein sequence
MNHLNDKALR IIGPLALWAV GTVFFNLNVL VDAPVSRWRF VTFGIFTLYL SWFTIRTLVI 
QAQRQYPGLE RTRQRIIWLA VLSLPATAGL VLVRLLLTIY YLFAGHTRPD LGDPLFMFGI
GLFYATIIGA IYEARYFFWQ WLVEKRASEE LRRAKLEMQL NSLKGQVQPH FLFNSLNSLQ
ALVKAQETDK AVRFIGDLAQ VYRYLLQSNE QTLISLDDEL TFTHAYLGLL KTRFDEGLQL
EVAIDPAYRS YRLPPLTLQL LVENAVKHNI VSASRPLTIR LYSNGHQTLV VENNLQRRPR
SDVASDKKGL LTISQKYRLL GQPDIDIQET EQAFMVTVPL IGC