Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2776 |
Symbol | |
ID | 8726526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3352135 |
End bp | 3353166 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_003387590 |
Protein GI | 284037660 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.647041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCACC TGAACGACAA GGCACTACGC ATCATCGGCC CGCTGGCGTT ATGGGCCGTC GGGACGGTAT TTTTCAACCT GAATGTGCTG GTCGATGCCC CCGTCAGCCG CTGGCGGTTC GTAACGTTCG GTATTTTTAC GCTCTATCTG TCGTGGTTTA CCATTCGGAC ACTGGTTATA CAGGCGCAGC GACAATACCC TGGGCTGGAA CGTACCCGGC AGCGCATCAT CTGGCTGGCG GTGTTAAGCT TGCCCGCCAC CGCCGGGCTG GTGCTGGTGC GGCTGCTGCT AACGATCTAC TACCTGTTCG CGGGTCATAC CCGGCCCGAC CTCGGCGACC CCTTGTTCAT GTTCGGCATC GGCTTGTTCT ACGCGACCAT CATCGGAGCC ATCTATGAAG CCCGGTATTT TTTCTGGCAG TGGCTGGTCG AAAAACGCGC ATCGGAGGAA CTGCGCCGGG CGAAGCTCGA AATGCAGCTT AATTCGCTGA AAGGGCAGGT GCAGCCGCAT TTTCTGTTCA ACAGCCTAAA CAGCTTACAG GCGTTGGTGA AAGCCCAGGA AACCGACAAA GCCGTGCGGT TTATCGGCGA TCTGGCGCAG GTGTATCGGT ATTTGCTGCA AAGCAACGAG CAGACGCTTA TCTCGCTCGA TGATGAGCTG ACCTTTACCC ACGCTTACCT GGGCCTCCTG AAAACGCGCT TCGATGAGGG TTTGCAGCTC GAGGTAGCCA TCGACCCAGC GTACCGCAGC TATCGCCTGC CCCCGCTGAC GCTGCAACTG CTGGTCGAAA ACGCGGTGAA GCACAACATC GTCTCGGCGA GCCGCCCGCT CACGATTCGG CTGTACAGTA ACGGCCATCA AACGCTGGTA GTCGAAAATA ACCTGCAACG CCGGCCCCGC TCCGACGTTG CATCCGACAA AAAAGGGCTG CTGACCATTA GCCAGAAGTA CCGACTGCTG GGCCAGCCCG ATATCGACAT TCAGGAAACC GAACAGGCAT TTATGGTAAC GGTGCCGCTT ATAGGATGCT GA
|
Protein sequence | MNHLNDKALR IIGPLALWAV GTVFFNLNVL VDAPVSRWRF VTFGIFTLYL SWFTIRTLVI QAQRQYPGLE RTRQRIIWLA VLSLPATAGL VLVRLLLTIY YLFAGHTRPD LGDPLFMFGI GLFYATIIGA IYEARYFFWQ WLVEKRASEE LRRAKLEMQL NSLKGQVQPH FLFNSLNSLQ ALVKAQETDK AVRFIGDLAQ VYRYLLQSNE QTLISLDDEL TFTHAYLGLL KTRFDEGLQL EVAIDPAYRS YRLPPLTLQL LVENAVKHNI VSASRPLTIR LYSNGHQTLV VENNLQRRPR SDVASDKKGL LTISQKYRLL GQPDIDIQET EQAFMVTVPL IGC
|
| |