| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2764 |
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| Symbol | |
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| ID | 8726514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3340378 |
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| End bp | 3343689 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003387578 |
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| Protein GI | 284037648 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.533832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGAT ATCTAGGCTC TACTAGTCTT GGTTGGAAAG TTATGAGCTT ACTGCTACTT
CAACTAACCT TAGTTGCCCT TTTTGCCAAT ATTTCCTTCG CTACGGACGG AAGAGCGCAG
GAAGTGCTGG ATCGGAAAAT TTCGCTCCAG GTAACCAATC GGAACATCAG CGACGTGCTG
GCCCGCATCG AAAAACTGGC GGACGTAAAG TTTTCGTATA GCCCAAATCT GATTCAGGCT
GACCGTCTAA TTTCGTTCGC CACAACCGAG AAGCCACTAG CCCAGGTTCT GACTAACCTG
CTTGAACCGT TACAGATAAA GTACGAGCTT GTTGGTAATC GGCTGATTCT TACCCGCATC
AACCGAAAGC TATCGACTTC ACCAGAGCAG GTCCAGGAAG ACGCTATTAC GCCCCCAATT
GTTGTACGAG GCAGGGTGCT CGACGAGTTG GGGAAGCCGA TTCCTGGTTC GACTGTTCTG
GTGAAAGGTA CAAGTAATAC GGGTACGGTA ACCGACGCTG ATGGTACCTA TACGCTGAAC
GTCCCGGATG GCGCGAAAAC ACTGGTCGTC TCATCAATCG GTTTCACAGC ACAGGAAGTT
TCTATTGACA ATCGCACGAC CATTACTATT ACACTCAAGA CGGACGTTAA GTCGCTAAAT
GAAGTGGTAG TGGTAGGCTA CGGCACACAA CGCCGGGCGG AAGTGACCTC CGCTGTGGCG
ACGGTGAAGG CTGAGGACTT TAACCAGGGC GGTGTTCGCA GCCCGCTCGA CCTGATTCAG
GGGAAAGTAG CGGGGCTGAC CATTACCCGT ACGCAGGGCA ACAATCCCAA CGCAGGGGCG
TCCATTCAAC TACGGGGTCT GGTGTCGGTC AACGGTAGTC AGTCGCCCTT GATCGTTATC
GACGGTATTC CGGGCGGCAA CCTCGATCTG CTCCAGCAAG ACGATATTGC GTCCTTCGAC
GTGCTGAAGG ACGGATCGGC CGCAGCCATC TACGGCACGC GGGCCAACGC GGGAGTGATC
CTGATTACGA CCAAAAAGGG ACAAGCTGGT CCGCCCCGTT TCGATTATTC CACGTACGTA
CAGCGCGAGG TCGTAAGCCG TCGACCGCGT TTTTTGAACG CCGACGAGTG GCGCGCCTAT
AAAGCCGACC CAACTAATGT GAAAGCATCG CAGATGACGG ATCTGGGTGC GTCAACGGAT
TGGTACAACC AATTGATCAA CCGCGATAAC CTGAGTCAGT ACCATAACCT GGCCATGTCG
GGCGGGAACG CGTCCAGCAA TTATCGGGCG TCCTTTTATT TTAATGGAGC CGATCCCATT
ACGCTTCAGA ACGACCGCAA GCAGTACGGT GGTCGGCTAA GTATGTTTCA GCGCGGCCTG
AACGACCGTT TGTCGGCACA GGCTAACCTG GCAACCAACT TGAGCAAAGG CAATTTGCTG
GGTGGTCAGG CCGGTGATTT TGAGAATGCG CTGGGCCGCA ATCCGACGCA ACCCGTCTAC
AATCCTAACG GTACGTTTTA TGAAGAAGGG TCTACGACCA ACCCTATTGG CCGGCTCACG
AAGGAACGCA ACCGTCGTGA CCAGCTAACC ACCTCGGTTG ATGCACGCAT AACCCTGGAG
CCCATCGACG GGCTGAAGAT TTCGGCGTTT GGGTCGTACG TTCGGGATAG CTGGAATGAT
AACGAGTACC GCCGTACCGA CTCTCGCTTT TCGCAGATCG GTACACTGAA TGGTACCAGC
GTAAACGGAA CCGGCTACGC TTACAAGCGT AACTACATTT CTAACTACTA CGCGTTCGAG
CCAACGATGG AATATAGCCG TACCCTTGCA ACCGATCATA GCTTGCGGGC ACTCGTTGGC
TACAGCTATC AGTATGGTAC GGTAGAAGAT TTCTCGGCGG GCAACAGTGG GTTTCTTAAC
AACGTCTTTG AGGAAAATAA CCTGGGCGCT GGTAACTTTC TGCAACTAGG TAAATCATCG
TTGTACAGCT TCAAAGAAGA CAACAAGCTG ATCGCCTTCT TCGGCCGATT GAATTACGCC
TATAAGGACA AATACATCGC TCAGTTCATT CTACGCCGTG AGGGGTCGAG CCGGTTCGGT
GCCAACAACA AGTTCGGCAA TTTCCCGGCG GTGTCGGCAG GCTGGACAAT CAGTCGGGAA
AGCTTTATGC AAAACATAAA GTGGTTGAAC ACCTTAAAAT TGCGGGCTGG CTACGGAGTC
ACCGGTAACC AGGGCATACC AAACTATCAA TCGCTGGTAC GACTCAGCAC GGGTAATCAG
TACCTGAACG ATGATGGTGT GTGGCGGCAA ACCTACGGCC CCAGTAACAA CCCCAACCCC
AATCTGCGCT GGGAACGAAA GGGCGAGTTT AACGTAGGGC TTGATTTTTC GCTATTAAGC
AACCGGCTGT CGGGCACACT TGACGTATAT AGCCGACGTA CCACCGACCT GCTGGGTAGT
TTCAACACGC AACTGCCAGC CTATATCCAG TCGACCTTGT ATACGAACGT AGGCACTATC
GCCAACAATG GAATCGAGCT GTCGCTGACT GGCACGGTGA TGAAACGCGA CAACTTCAGC
TGGAGCATGG ACCTGATTGC CAGCACGCAG TCGAACAAGC TGGTATCCTT TTCGAACGAC
GTCTTCAAAG TAACGTTCCT GAATTTTGGC GATATTGGCG GCTTTGGCGC ACTTGGGTCG
GCCATTCGCA CCATTGAGGG AGGACCATTG GGCAGCTTCT ATGGGAAACG TTTTGCCGGA
TTCACGCCCG AAGGCCGGTG GCTGTTCTAT AAGGCTACCG GGGAAGCCGT TACGGCCGAC
AAGATCGTTC CCAACGATGA CTACGCGTAC ATCGGCAACG GAATTCCCAA ATACTATGCC
TCCTGGACTA ATCGCTTTCA GTACAAAAAT CTGGACCTGA CCCTGTTTTT CAGGGGCAAG
TTCAAGTACG ACATTCTAAA CCTGCAACAG GTGTTCTTCG GCAATAAAGT GTACCTGCCT
AACAATGTAT TGCGGGACGC GATCACGCGC AACAATCAGA TCAACGACGC CCTGCAATAT
TCCAACTATT ACCTCGAACG GGGTGATTTT GTGAAACTCG ACAACGTAAC GCTGGGCTAC
AATTTTAGAT TTAAAACTAA AGCCGTCCGC AACCTGCGCC TGTACCTGAC GGGCCGCAAC
CTACTGACGA TCACAGGCTA CCGGGGTGTC GACCCGGAGG TTGACGACAC CGGATTAGCG
CCGGGCATTG ATGGCCGGGG CTTTTACCCG CGCACTCAGT CATATACAGC AGGTCTTCAG
TTTGGCTTCT AA
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| Protein sequence | MNRYLGSTSL GWKVMSLLLL QLTLVALFAN ISFATDGRAQ EVLDRKISLQ VTNRNISDVL
ARIEKLADVK FSYSPNLIQA DRLISFATTE KPLAQVLTNL LEPLQIKYEL VGNRLILTRI
NRKLSTSPEQ VQEDAITPPI VVRGRVLDEL GKPIPGSTVL VKGTSNTGTV TDADGTYTLN
VPDGAKTLVV SSIGFTAQEV SIDNRTTITI TLKTDVKSLN EVVVVGYGTQ RRAEVTSAVA
TVKAEDFNQG GVRSPLDLIQ GKVAGLTITR TQGNNPNAGA SIQLRGLVSV NGSQSPLIVI
DGIPGGNLDL LQQDDIASFD VLKDGSAAAI YGTRANAGVI LITTKKGQAG PPRFDYSTYV
QREVVSRRPR FLNADEWRAY KADPTNVKAS QMTDLGASTD WYNQLINRDN LSQYHNLAMS
GGNASSNYRA SFYFNGADPI TLQNDRKQYG GRLSMFQRGL NDRLSAQANL ATNLSKGNLL
GGQAGDFENA LGRNPTQPVY NPNGTFYEEG STTNPIGRLT KERNRRDQLT TSVDARITLE
PIDGLKISAF GSYVRDSWND NEYRRTDSRF SQIGTLNGTS VNGTGYAYKR NYISNYYAFE
PTMEYSRTLA TDHSLRALVG YSYQYGTVED FSAGNSGFLN NVFEENNLGA GNFLQLGKSS
LYSFKEDNKL IAFFGRLNYA YKDKYIAQFI LRREGSSRFG ANNKFGNFPA VSAGWTISRE
SFMQNIKWLN TLKLRAGYGV TGNQGIPNYQ SLVRLSTGNQ YLNDDGVWRQ TYGPSNNPNP
NLRWERKGEF NVGLDFSLLS NRLSGTLDVY SRRTTDLLGS FNTQLPAYIQ STLYTNVGTI
ANNGIELSLT GTVMKRDNFS WSMDLIASTQ SNKLVSFSND VFKVTFLNFG DIGGFGALGS
AIRTIEGGPL GSFYGKRFAG FTPEGRWLFY KATGEAVTAD KIVPNDDYAY IGNGIPKYYA
SWTNRFQYKN LDLTLFFRGK FKYDILNLQQ VFFGNKVYLP NNVLRDAITR NNQINDALQY
SNYYLERGDF VKLDNVTLGY NFRFKTKAVR NLRLYLTGRN LLTITGYRGV DPEVDDTGLA
PGIDGRGFYP RTQSYTAGLQ FGF
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