Gene Slin_2763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2763 
Symbol 
ID8726513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3339043 
End bp3340188 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content53% 
IMG OID 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003387577 
Protein GI284037647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.510605 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACT ATTTACAGTA TCAATGCGAT GATTTTGTGG CTGATTCCTA CTTCCGACAG 
TGGGTGAAAC AGCCGACTGA TGCGTCTGAT CATTTCTGGA ATGGTTTTTT AGCTGACCAC
CCCGAACGAG CCGAGGTTGT ACACCTAGCC ATCGCGATGG TACAAAAGCT GTCGGAAGCA
ATGGGCGATC TGGCCGATGA TCCAGCGGAT GAAGCTCAAA AAGCGGCCAT CTGGAAGGCG
GTGCGGGAAA GGGTAAGCAC CCCACTCCAG CCTGTTAACT CACCACCGTT TATCGTTAGT
GCTCCACCCC GACACTGGCT TGGTTGGGCG GTGGCCGCTT CGGTAGTGGT GGCGATAAGC
GTGGGCGGGT GGTTGTGGGT CAGGCATTCA TCTAGTGATA GACAGAGCCA ATCTATTGTT
GCCAAGCTGC CAACCAACCC GTTTATTGAA CGCTGGAATC AGACTGCCAG TACTCAATTG
ATTTCATTGC CCGACGGAAG TTCGGTGGTT TTGCAGAAAG GGAGCAAAAT CAGCTACTGG
AACTCCTCCC CGGATTCGGT CCGTCAGGTA ATGCTGGTGG GTGAGGCTTA CTTCGAAGTC
GTTAAAGACG CGCGGCATCC ATTTATCGTA CGGGTAAATC AGCTGGTCAC GAAAGTACTG
GGGACCAGTT TTAACGTACG AGCCTACGCC GACGATGCAC GCGTAACGGT TACGGTGCGC
TCAGGCCGGG TAGCCGTATA TACGTCAAAT TCGGATATAG ATAACCCGTC ACGGCCAGTG
ATGCCTGCCG CGTCCGATAG CGTTATCTTA ATGCGTAACC AGCAACTTGT TTTTGCCAGG
CAACAGGCCG AATCAGCGCA ACGCCGGGAA ATCACCCTGC CCGCCAACAG CCCGAAAGGG
TCCCTCCTCA ATATGTCCAC GTTTGTCTAC AACGGAACGC CTATCAGTGA GGTATTCCGC
GAACTGGAGC GGGTGTACGG CATCACCATC AGTTACGATA AAAACGCGCT GGAAAGTTGT
CGTCTGACTA CCGATCTGAC CGATGAGCCA TTGCTCAACA AAATGACCAT CATCTGCAAG
AGCATTGAAG CCGCCTACAC CGTACAGGAA ACCCAATTTG TGGTGTCTGG GCGCGGCTGT
CAATAA
 
Protein sequence
MKDYLQYQCD DFVADSYFRQ WVKQPTDASD HFWNGFLADH PERAEVVHLA IAMVQKLSEA 
MGDLADDPAD EAQKAAIWKA VRERVSTPLQ PVNSPPFIVS APPRHWLGWA VAASVVVAIS
VGGWLWVRHS SSDRQSQSIV AKLPTNPFIE RWNQTASTQL ISLPDGSSVV LQKGSKISYW
NSSPDSVRQV MLVGEAYFEV VKDARHPFIV RVNQLVTKVL GTSFNVRAYA DDARVTVTVR
SGRVAVYTSN SDIDNPSRPV MPAASDSVIL MRNQQLVFAR QQAESAQRRE ITLPANSPKG
SLLNMSTFVY NGTPISEVFR ELERVYGITI SYDKNALESC RLTTDLTDEP LLNKMTIICK
SIEAAYTVQE TQFVVSGRGC Q