Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2762 |
Symbol | |
ID | 8726512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3338318 |
End bp | 3338923 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003387576 |
Protein GI | 284037646 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.452379 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTAATT TCCCCATCAG TAGACAGGAC CGATTCGAGG ATGAAGCTAG CCTATGGGAA GCTTTTCAAC AGGGTGATAT ACAGGCCTTT GAGGTGGTTT ACCAGACACA TGTATCTGCT CTATTGGCTT ATGGAAAACA CCTTTGTCGT GATCATGACC AAGTAAGTGA TGTAGTTCAG GATGTTTTCG TTGACATCTG GACACGTCGG GCGACACTTC GAAGTCTGCA CACGATCAGG TACTATTTAT TCCGAATCAT GCGGAATAAG TTGGCGCGAT TGCGCCAGAA TGCCGTACTC TTCATTGACG ACCAGCAAAC CCCTCCCCCC AAAGACTTAC TCACCCAGTC AATTGAGTTT CTTATCAGCC AGCAGGAAAC AAATCAGCAC CAGATAGCCC AGTTGAAGCA GGGTATCAGC CGATTGCCCG ACCGTCAACA CGAAGCCATC ATACTGGCGT TCTATCATAA CTTAAGTAAT GACGAAATTG CTGATCTTAT GGGTATCAAC CACCAGTCGG TTATCAATCA CTTAAACCGG GCGCTCGCAT CATTACGCTG TGTGGTTGAC AAAGCCTTCC TGCTGCTTCT GTACTTTGTT GAGTAA
|
Protein sequence | MRNFPISRQD RFEDEASLWE AFQQGDIQAF EVVYQTHVSA LLAYGKHLCR DHDQVSDVVQ DVFVDIWTRR ATLRSLHTIR YYLFRIMRNK LARLRQNAVL FIDDQQTPPP KDLLTQSIEF LISQQETNQH QIAQLKQGIS RLPDRQHEAI ILAFYHNLSN DEIADLMGIN HQSVINHLNR ALASLRCVVD KAFLLLLYFV E
|
| |