Gene Slin_2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2762 
Symbol 
ID8726512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3338318 
End bp3338923 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content47% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003387576 
Protein GI284037646 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.452379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATT TCCCCATCAG TAGACAGGAC CGATTCGAGG ATGAAGCTAG CCTATGGGAA 
GCTTTTCAAC AGGGTGATAT ACAGGCCTTT GAGGTGGTTT ACCAGACACA TGTATCTGCT
CTATTGGCTT ATGGAAAACA CCTTTGTCGT GATCATGACC AAGTAAGTGA TGTAGTTCAG
GATGTTTTCG TTGACATCTG GACACGTCGG GCGACACTTC GAAGTCTGCA CACGATCAGG
TACTATTTAT TCCGAATCAT GCGGAATAAG TTGGCGCGAT TGCGCCAGAA TGCCGTACTC
TTCATTGACG ACCAGCAAAC CCCTCCCCCC AAAGACTTAC TCACCCAGTC AATTGAGTTT
CTTATCAGCC AGCAGGAAAC AAATCAGCAC CAGATAGCCC AGTTGAAGCA GGGTATCAGC
CGATTGCCCG ACCGTCAACA CGAAGCCATC ATACTGGCGT TCTATCATAA CTTAAGTAAT
GACGAAATTG CTGATCTTAT GGGTATCAAC CACCAGTCGG TTATCAATCA CTTAAACCGG
GCGCTCGCAT CATTACGCTG TGTGGTTGAC AAAGCCTTCC TGCTGCTTCT GTACTTTGTT
GAGTAA
 
Protein sequence
MRNFPISRQD RFEDEASLWE AFQQGDIQAF EVVYQTHVSA LLAYGKHLCR DHDQVSDVVQ 
DVFVDIWTRR ATLRSLHTIR YYLFRIMRNK LARLRQNAVL FIDDQQTPPP KDLLTQSIEF
LISQQETNQH QIAQLKQGIS RLPDRQHEAI ILAFYHNLSN DEIADLMGIN HQSVINHLNR
ALASLRCVVD KAFLLLLYFV E