| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2748 |
|---|
| Symbol | |
|---|
| ID | 8726498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3322601 |
|---|
| End bp | 3323536 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003387562 |
|---|
| Protein GI | 284037632 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00012747 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAC ACAACGAGAA CCCAGGGATG GCTCAGAATA TGTACTCTGA CGAGGAATTA
ATCACCCATT TTCCTGGCTT TACCAACCAG TATGCAACCG TAAACGGGGT GCGGCTGCAT
TATGTCGAAG GTGGGACAGG CATACCTTTG GTTTGTTTAC CGGGCTGGCC GCAAACCTGG
TATTCTTACA AGCCTGTTGC GGTAGAACTG GCCAAAACGT ACCGTGTCAT TATTGTCGAC
ATAAGAGGGA TGGGTAGCTC CGAAAAGCCC CAATCCGGCT ACGATAAGAA AACAATGGCC
GCCGATATTG CCGCCTTGTT ACAGCAGTTG GGCCTGACAA ACGTTCATCT TATGGGCCAC
GACATCGGCG GCATGGTAGC CATGAGTTTT GCGTTTAACT ATCCCCAATT CACCCAAAAG
CTGATTGTCC TGGATGGCTC GCATCCCAGC GAAGGCCTGA TGCAGATGAG TTTGATACCC
CCTCGGGGTA CGTTTGCCGG GAAGATGGAT GCCGATAGAC CCTACGCCTG GTGGATGGGA
TTCAATCAGG TAAAAGAATT GCCGGAAAAG ATACTGGCCG GGCGATTCCA GTACTTGCTG
GACTGGCTTT TTCAGTATGT CATGATTGAC GACAGCAAGA TGTCTCCTCT GGAAAGAGCG
GTATATGCCA GTTCGTATAA TGACGCCGAG AGCATCCGGG CAGCGAATGC GTGGTATCAA
ACATTTCAGC AGGATATAGA CGATGCCCAA ACGTATCAGC CGCTTGCCAT GCCGGTGTTA
GGCATCGGAA GCTATGTGAG TTACAACTAC ATGAAGATGG GATTGCCTTA TGTAGCCAAA
GACGCACAAG TGGTTGGAAT TTTAGACAGT GGTCATTACC TGTTTGAAGA GCGGCCCGCC
CAGGTGCTTG ACGCAGTTTT GCGGTTTCTT GCCTGA
|
|---|
| Protein sequence | MIQHNENPGM AQNMYSDEEL ITHFPGFTNQ YATVNGVRLH YVEGGTGIPL VCLPGWPQTW
YSYKPVAVEL AKTYRVIIVD IRGMGSSEKP QSGYDKKTMA ADIAALLQQL GLTNVHLMGH
DIGGMVAMSF AFNYPQFTQK LIVLDGSHPS EGLMQMSLIP PRGTFAGKMD ADRPYAWWMG
FNQVKELPEK ILAGRFQYLL DWLFQYVMID DSKMSPLERA VYASSYNDAE SIRAANAWYQ
TFQQDIDDAQ TYQPLAMPVL GIGSYVSYNY MKMGLPYVAK DAQVVGILDS GHYLFEERPA
QVLDAVLRFL A
|
|---|
| |