| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2720 |
|---|
| Symbol | |
|---|
| ID | 8726470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 3290844 |
|---|
| End bp | 3291383 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | 20S proteasome A and B subunits |
|---|
| Protein accession | YP_003387535 |
|---|
| Protein GI | 284037605 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.211023 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCTA AAATTCATGC AACGACCGTA GTGGGTATTC GGCATAATGG TCATGTGGCC
TTGGGTGCCG ATGGGCAGGC TACGATGGGT AATACCGTTG CCAAAAGCAA TGTTCGTAAA
GTACGCGTTC TGATGGGCGG CAAAGTGCTG GCCGGTTTTG CCGGTTCAAC GGCCGATGCC
TTCACACTCA TTGAGCGCTT TGAAGAAAAA CTTAATGCCT ACGGCGGTAA CCTCAAACGG
GCTGCTATTG AACTGGCCAA AGACTGGCGG ACAGACCGGT ACCTCAGAAA ATTGGAAGCT
ATGTTAATTG TCGCGTCTAA AGATGACCTG CTACTGGTAT CAGGTACGGG CGATGTCATC
GAGCCGGATG CGGACGTAGC GGCCATTGGC TCAGGAGGCA TGTATGCCCA GTCGGCAGCG
CTGGCGTTGA AGAAACACGC CACTGAGCTG TCGGCCGAAG AGATGGTTCG CGAAAGCCTG
CATATTGCCG CTGATGTATG TATCTACACA AACCATAATT TGGTGGTAGA AACGTTATAA
|
|---|
| Protein sequence | MQPKIHATTV VGIRHNGHVA LGADGQATMG NTVAKSNVRK VRVLMGGKVL AGFAGSTADA
FTLIERFEEK LNAYGGNLKR AAIELAKDWR TDRYLRKLEA MLIVASKDDL LLVSGTGDVI
EPDADVAAIG SGGMYAQSAA LALKKHATEL SAEEMVRESL HIAADVCIYT NHNLVVETL
|
|---|
| |