Gene Slin_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2719 
Symbol 
ID8726469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3289314 
End bp3290786 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content48% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003387534 
Protein GI284037604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.369287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAG AAAACCTGAA AGGCTATACA ATGAACCAGC GCATTGCGTT TGGATTCATC 
GTGGCTATGG TTCTCATCAC ATCGGGTTTC GCCATCTCCT TTTATAGCTA CAGTCGGTAT
GATGAAGACA TGCAGCGGGT TCGCAATACC TATGAAGTCA TAGGCTCACT GGAGAACGTA
CTGTCGCTCA TGAAAGACGT CGAAACCGGT TCGCGGGGTT ACGTTATTAC CAACGACTCA
GCCTACCTGG AGCCCTACAA TAAGGCAATG CAGCTACTTC CAGGCCAGTT CGAACATTTG
GAAATGCTGA CCAAGGATAA CAAAGTTCAG ACCAAGCGTC GCCTTTTTCT TAAGCACTTA
ATTGAAAACA AGCTGGCTAT AACCGAAGCC CGTTTAACTA TTTCGGCTTT TGATAGACGG
AACAATGCAA TAAGCGCGGA AAGTAAGCGC CGGATGGACC TCCTGCGAAA ACACGTTGCG
TTGATGATTG ATACCGAGCG TGTTCTGATG GACACTAGAA ACCGGCAGGC TGACAGCTCG
TTCCGGAGTA CGCTCGTCAT CATTTTCGTC TTGTCGCTGA TGACCTTCCT GAGCCTGGCC
ATTTTATACC GGTTGCTGGA AAAAGAGCTG GATCATCGGC AGCAAACCGC CGACCGGCTG
CTGGCCTACG ACTCCCAGCT TCGGGGGCAG ATTCGACAGC TGGAAGCCTC AAATGAAGAA
CTGGAGCGGT TTGCTTTTGT CGCCAGCCAT GATTTACAGG AGCCGCTGCG TAAAATTCAG
TCCTTCTCCA ACCTGATCAC CGAGCGATAC GCCAATTTGT TCGATGCGGA TAGTATGCTG
TTCATGAGTA AAATCTCAAA CTCAGCAGAA CGTATGTCTA AACTGATCAA AGACTTGCTG
AACTTCTCCC GTATCTCGAG TCATCAGGAA CAATTTAAAG TGGTGCCCCT TCATGAAGTG
GTACAACGGA TTCTGGACGA TCAGGAGCTT CGGATAAAAG GGATGGATGT ACAACTGGAA
ATCGGTGACC TGCCCATTAT TGAAGGCATT GCCAGTCAGA TGGATCATCT GTTTAATAAT
CTGATTTCCA ATGCGTTAAA ATTTGTAAAG CCGGGTGTGC ATCCAGTTCT CCGTATTCAG
GCCCGGGCAG TGGATAGCGA CAGTTACCCG GACTTAATAC CCGATCGGCG CTACTTCGAA
ATTTCCGTTG AAGACAACGG AATTGGGTTC GATGAGAAGT ACGTAGATCA TATCTTTAAA
GTTTTTCAGC GTTTACACGG CAAGAGTGCC TTCGAAGGAA CCGGTATCGG CCTTGCCATC
TGCAAACGCG TTGTCATGTA TCACCACGGC TACATTACGG CGCGTAGTCA ACCGAATGAG
GGGGCTACGT TTGTAGTCGT TTTACCCGAA AGCCAATCTC AACAACAATA TGACCGACCA
ACTTCAGAAG CCTATTCATA TCCTGCTGGT TGA
 
Protein sequence
MLKENLKGYT MNQRIAFGFI VAMVLITSGF AISFYSYSRY DEDMQRVRNT YEVIGSLENV 
LSLMKDVETG SRGYVITNDS AYLEPYNKAM QLLPGQFEHL EMLTKDNKVQ TKRRLFLKHL
IENKLAITEA RLTISAFDRR NNAISAESKR RMDLLRKHVA LMIDTERVLM DTRNRQADSS
FRSTLVIIFV LSLMTFLSLA ILYRLLEKEL DHRQQTADRL LAYDSQLRGQ IRQLEASNEE
LERFAFVASH DLQEPLRKIQ SFSNLITERY ANLFDADSML FMSKISNSAE RMSKLIKDLL
NFSRISSHQE QFKVVPLHEV VQRILDDQEL RIKGMDVQLE IGDLPIIEGI ASQMDHLFNN
LISNALKFVK PGVHPVLRIQ ARAVDSDSYP DLIPDRRYFE ISVEDNGIGF DEKYVDHIFK
VFQRLHGKSA FEGTGIGLAI CKRVVMYHHG YITARSQPNE GATFVVVLPE SQSQQQYDRP
TSEAYSYPAG