| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2706 |
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| Symbol | |
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| ID | 8726456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3274824 |
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| End bp | 3277610 |
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| Gene Length | 2787 bp |
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| Protein Length | 928 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003387521 |
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| Protein GI | 284037591 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.332396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGCT TACTATTTCT GGTTTTGTGC TTGTGTCCTG TGTTTCTTCA GGCGCAGTGC
CTCTCTATGG CCCAGCGGTA TCAGCGTCTT ACCGGATTAT CGGCCTTACC AACTCCCGTT
GAGGTAATTG CGGAGGCAAC CCGGCTGGAA AATCAATCCC GGTCCTGCGG GGCTATATCA
GATTCCGTTT ATGCTAAAAC CCTGCATGTG TTGGGTCGCT CGTATTGGTA CGTTGGGAAA
TTAGACACTG CTATTACCCT AACGAAGCGA GCCATTGCAA TTAATGGAAT GAATCGACCC
AATGTCAGGC GGGCTAATTT AGTTCACAGC TATTATAACC TTGGTCGAAT TTATGGTGAC
CAGACCCATT ATCGGCTGGC TATTCAAGCA TTTACAAACG CTGTCGCCAT TGCGAAGCAG
TATCCCGAGA AGTGGACTTC AGGAGCGAGT GCTTATGCGG AAATAGCGTT TATCTACTAT
AATATCGGTG ACTATGAAAA GGCGGCCAAT GTAGCTCAGG AAGGTTTCTT TCTGTCTCAG
CGAGCTAATG ACCCCAAAAT GGCAGCTAAT ACGCTGGTGC AGCAAGCCCA GGCCCTAATC
AAGATAAATA ATCTAATAAC TGCCAATTCG GCTCTTCAGA GGGCCCTTGG GTTTGCCCAA
CGAATTGGTG AATTGAGCAT TACCGCTAAT ATTTATTCCC TGCTGGCTGA AGTTGCCAGT
AAGCAGGGGT TAAGTTTAAA AACGGTTAGC TATTATAGAC AGGCTTTCGA AATCAATAAA
CAAACAAAGT TTCGATATGG CTGTGCTCAG GCCCTGGATA ATTTGGGGTT TACCTACGCA
GAAATGGCCC AGTACGACAA AGCTGTAATT ATTTATAAGC AGGCACTTGG CTATTGTGAT
GATATGGGCG GTCGTTTAAC GATACTAAAC AAAATAGGTA AATCCCAACT CGGCCTTAAA
CATCACCATG AAGCATTGCG GTATTATCAG CAGGCGCTTC GGATGATTGA TTCGTCGTTA
GATAGTACCC AGTTTAATAC TAATCCGGAT AACAGGTTAT TTCGTCTGAT TGCTTACAAA
AGCTATCTGC TCTCTGTGAC TCAGGACAAG GCCGATACCT GGCTCGACTA TGCTAAAATA
GCTAATAATG ACCCTGTACG ACTCCGCTAT GCCCTGGAAA CCTATAAAGT AGCCGATCAG
ATGATCGACT TTATGCGGTG GGAGCATACC GGTCAGCAGT CGAAGTTGTT TTGGCGGCAG
AAGACCCGGG GCATGTACGA ACGCGCCATT GAAACTTGCT TTTTACTGGG CGATGCCACA
CAGGCTTTTC ACTTTCTGGA GAAAAGTCGG GCCGTTATGC TGGCCGATAA GCTGAACGAA
CTCGGTGCCC GGCAACAACT AACCGAACAA CAGATTGCAC AGGAACAACA TCTCCGGCAG
GCCGTTAGCA ACCAGCAAAC TACTCTGGCC AGTCTCCCAT CCGACAATGG ACCTGCCTAC
AACGCAGCCC GGATGGCTCT TTTTGCGAAA CAGGATAGCT TGACCGCCTT CCTTAAAAAC
CTTGAAGCGT CGAATCCAGC TTATTATCAA TACAAATACG CTAACGCAAC GATAGCGCTC
GCTGACGTAC AACATTACCT GAAAAAACAG TCTGGTTCGC TGGTAACGTA TTTCGTTGGC
GATAGTGCCT TATACCTGAT GGCTGTTACG GGCGATAAAG CCGTTTTGAA GAAGCAATCG
ATCAAGGCGT ATACAGAAGC ACTTCACCAA TTTGCCGGGT TACTGGCCAA TTCGGCAGCT
ATGAGCAGAC GCGACGATGT AAATCGGTTT CTGGGCCTCA GCAACGACTT GTATCGCCAG
TTACTCGCCC CATTCGGCTT GCCAAAAGGT CGGGTCTTGG TATCGCCCGA TGGCTTTTTT
ATTCCGTTCG ATGCCCTGAG TCGTTCGGCT GGAAAAGCAG ATTTCGCAGT CAATGATTAT
GCATTCAGTT ATGTGTATTC CGTTGGTTTA TTGCTGAAAA ACGGTGTGAA ACGATCCCCA
AATCAGGCTT TTCTATCGAC CGATTTTCTG GGCGTAGCCC CGGTTGAGTT TGCTCCCCGG
CTTAATCAGG TGCTGCTGCC TGGCTCGGAT GAAGCCCTGA CCCCCATTGC CGGGCGGTTT
AGCACGTCGA CAGTACTCAC GCATGGTAAG GCTACAAAAG CTTCTTTTCT GGAAAAAGCA
GCTAACGCCA GGGTCATTCA TCTGTTCACC CACGCTACCG CCGATAGTTC CGACCGGGAG
CCGTCCCTGT ATTTCGCCGA CTCAACTTTA CAGCTCTCCG ACCTGCGTGA CGGCGTATTG
CCCAACGTGG AACTTGTAGT GTTGGCAGCG TGTAAAACCG GTATCGGTGC CAACCAGCAG
GGGGAAGGCG TATTCAGTCT GGCGCGGGGA TTTGCTGCAT TGGGCGTACC CAGCGTGCTC
ACAACGCTCT GGAGCGTTCA GAACGAAGCG ACTTACGAAC TAACCGACCT TTTTTATTCA
TACCTCGATC AGGGTTTGCC CAAAGATGTG GCCCTGCAAC GGGCCAAGCA GGATTGGCTA
AGCACCGCCG AAGGCGAAAA TCAACTGCCT AACTATTGGG CAGGTCTAAT CATAGTCGGT
GATTCTAGAC CACTCATCCA TCTCTCCTAC AGCCCTTGGG TTGGTATTTT GTCTCTACTG
GCCATAATTG GGTTGGGAGG AATCTGGTTC TGGAAAAATC GGGAGCGACG TGCTACGGCT
GTATTTTCAG CTGCTCACTC AGCTTAA
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| Protein sequence | MWRLLFLVLC LCPVFLQAQC LSMAQRYQRL TGLSALPTPV EVIAEATRLE NQSRSCGAIS
DSVYAKTLHV LGRSYWYVGK LDTAITLTKR AIAINGMNRP NVRRANLVHS YYNLGRIYGD
QTHYRLAIQA FTNAVAIAKQ YPEKWTSGAS AYAEIAFIYY NIGDYEKAAN VAQEGFFLSQ
RANDPKMAAN TLVQQAQALI KINNLITANS ALQRALGFAQ RIGELSITAN IYSLLAEVAS
KQGLSLKTVS YYRQAFEINK QTKFRYGCAQ ALDNLGFTYA EMAQYDKAVI IYKQALGYCD
DMGGRLTILN KIGKSQLGLK HHHEALRYYQ QALRMIDSSL DSTQFNTNPD NRLFRLIAYK
SYLLSVTQDK ADTWLDYAKI ANNDPVRLRY ALETYKVADQ MIDFMRWEHT GQQSKLFWRQ
KTRGMYERAI ETCFLLGDAT QAFHFLEKSR AVMLADKLNE LGARQQLTEQ QIAQEQHLRQ
AVSNQQTTLA SLPSDNGPAY NAARMALFAK QDSLTAFLKN LEASNPAYYQ YKYANATIAL
ADVQHYLKKQ SGSLVTYFVG DSALYLMAVT GDKAVLKKQS IKAYTEALHQ FAGLLANSAA
MSRRDDVNRF LGLSNDLYRQ LLAPFGLPKG RVLVSPDGFF IPFDALSRSA GKADFAVNDY
AFSYVYSVGL LLKNGVKRSP NQAFLSTDFL GVAPVEFAPR LNQVLLPGSD EALTPIAGRF
STSTVLTHGK ATKASFLEKA ANARVIHLFT HATADSSDRE PSLYFADSTL QLSDLRDGVL
PNVELVVLAA CKTGIGANQQ GEGVFSLARG FAALGVPSVL TTLWSVQNEA TYELTDLFYS
YLDQGLPKDV ALQRAKQDWL STAEGENQLP NYWAGLIIVG DSRPLIHLSY SPWVGILSLL
AIIGLGGIWF WKNRERRATA VFSAAHSA
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