Gene Slin_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2701 
Symbol 
ID8726451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3267426 
End bp3267857 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content54% 
IMG OID 
Productsugar-phosphate isomerase, RpiB/LacA/LacB family 
Protein accessionYP_003387516 
Protein GI284037586 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0076574 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.215374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG CCATAGGCTC CGACCACGCT GGTTTCCGTT ATAAAGAAGC CATCCGACAA 
TATCTCACCA ACCTCGGGCA CGAGGTTATT GACAAAGGCA CGTATGCCGA AACGCCATCT
GTCGATTACC CTGTTTATAT CCGGCCTGTG GCAGAAGCCG TAGCTGCCGG TGATGTTGAC
CGGGGCATTG TGCTGGGAGG TTCGGGCAAC GGAGAAGCCA TCATGGCGAA CCGAATTAAA
GGGGTTCGCT GCGGTCTTTG CTGGAATGAA GAATCGGCCC GCCTGTGTCG CCAGCATAAC
GACGCTAACG TCATGTCGAT CGGCGAACGC ATGATGAGCG AAGAAACCGC CCTCAACTTA
GTCCAGATTT GGCTCGATAC GCCATTCGAA GGCGGTCGTC ACCTCGCCCG GATTCAGCAA
CTTGATCAAT AA
 
Protein sequence
MKIAIGSDHA GFRYKEAIRQ YLTNLGHEVI DKGTYAETPS VDYPVYIRPV AEAVAAGDVD 
RGIVLGGSGN GEAIMANRIK GVRCGLCWNE ESARLCRQHN DANVMSIGER MMSEETALNL
VQIWLDTPFE GGRHLARIQQ LDQ