Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2701 |
Symbol | |
ID | 8726451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3267426 |
End bp | 3267857 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | sugar-phosphate isomerase, RpiB/LacA/LacB family |
Protein accession | YP_003387516 |
Protein GI | 284037586 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0076574 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.215374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTG CCATAGGCTC CGACCACGCT GGTTTCCGTT ATAAAGAAGC CATCCGACAA TATCTCACCA ACCTCGGGCA CGAGGTTATT GACAAAGGCA CGTATGCCGA AACGCCATCT GTCGATTACC CTGTTTATAT CCGGCCTGTG GCAGAAGCCG TAGCTGCCGG TGATGTTGAC CGGGGCATTG TGCTGGGAGG TTCGGGCAAC GGAGAAGCCA TCATGGCGAA CCGAATTAAA GGGGTTCGCT GCGGTCTTTG CTGGAATGAA GAATCGGCCC GCCTGTGTCG CCAGCATAAC GACGCTAACG TCATGTCGAT CGGCGAACGC ATGATGAGCG AAGAAACCGC CCTCAACTTA GTCCAGATTT GGCTCGATAC GCCATTCGAA GGCGGTCGTC ACCTCGCCCG GATTCAGCAA CTTGATCAAT AA
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Protein sequence | MKIAIGSDHA GFRYKEAIRQ YLTNLGHEVI DKGTYAETPS VDYPVYIRPV AEAVAAGDVD RGIVLGGSGN GEAIMANRIK GVRCGLCWNE ESARLCRQHN DANVMSIGER MMSEETALNL VQIWLDTPFE GGRHLARIQQ LDQ
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