Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2698 |
Symbol | |
ID | 8726448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3264669 |
End bp | 3265394 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | 6-phosphogluconolactonase |
Protein accession | YP_003387513 |
Protein GI | 284037583 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.448278 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.149935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACTGA TTATTAAGAA GAACCCGGCC GATCTGGCGA AAGCTGCGGC TGATTTCATT GTCAAACGCA TCAAAGATAC CCTGAAGAAA CAGGATCGGT TTACGATTGC GTTGTCGGGC GGGAGTACGC CTAAAGCCCT GCACGAATTG CTCGCGAAGT CGCCTTATGT AGACCAGATT CCGTGGCTGC AACTGCATGT TTTCTGGGGT GATGAACGCT ACGTGCCCAT CGACGATGAG CAAAGTAATG CCGGTATGGC TTACGATACG CTGCTGGGGC ATGTGTACAC CCCGGAAGAG CAGATTCACG TCTGGCGTAC CGACCTCGAA CCCGATGCCG CAGCAGCCGA CTACGACCGG ATTCTGCACG AGTATTTTGG AGAAAGCGGC CCCTCGTTCG ACCTTGTTCT GCTTGGCATG GGCGATGATG GACACACGCT TTCTCTGTTT CCCGGCACCG AGGTAGTCCA TGAAAAAACG GCTTGGACCA AAGCATATTT CCTGACGCAG CAAAATATGT TTCGGCTGAC CCTGACCGCT CCCATTACCA ACCGGGCTTC CTGCGTAGCC TTTCTGGTGG CGGGTCCTAA AAAAGCGGAG CCGCTGAAAG AAGTACTCGA AGGGGCGTAT AATCCGGATA AATATCCATC GCAGGTAATC AAGCCAGTAG ATGGTGAACT GGTCTGGCTC GTCGATGAAA AGGCGGCTGC ACTTCTGCAG AATTAA
|
Protein sequence | MQLIIKKNPA DLAKAAADFI VKRIKDTLKK QDRFTIALSG GSTPKALHEL LAKSPYVDQI PWLQLHVFWG DERYVPIDDE QSNAGMAYDT LLGHVYTPEE QIHVWRTDLE PDAAAADYDR ILHEYFGESG PSFDLVLLGM GDDGHTLSLF PGTEVVHEKT AWTKAYFLTQ QNMFRLTLTA PITNRASCVA FLVAGPKKAE PLKEVLEGAY NPDKYPSQVI KPVDGELVWL VDEKAAALLQ N
|
| |