Gene Slin_2676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2676 
Symbol 
ID8726426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3237961 
End bp3239016 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content54% 
IMG OID 
ProductHtrA2 peptidase 
Protein accessionYP_003387491 
Protein GI284037561 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0673345 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC AATTTGTGGC CCTTTCCAGC GATACTTCGC AGACAGGTCA GGAAACATCG 
CCTGATTCAA TGCTTCTGGA CGCTTATTCC AATACGGTCG TAAATGTAGC CAAAAAAGTC
AGCCCATCGG TAGTACAGAT TAAGGTTACA AAACAACTCA TCGCGTCAGC ACCCGGTCGG
CAGCGTCAAT CTCCCCTTCC AGGACACCCG CCTGGCCGCG ACCGCATGGA AGGCGGCTCG
GGCTCGGGTT TCATCATTTC CAGCGATGGC TATATCATCA CAAACAACCA TGTTGTGGCC
GGAGCGTTGA CGATCAAGGT CCATCTGGCC GACTCCCGTG AATACGACGC CACCCTGATT
GGCCGTGATC CGGACACCGA CATTGCCGTT TTGAAAATCT ACGCCGATAG TCTGAAAGCC
ATTCGCTTTG CCGATTCAAA GCACTTACAG GTTGGCCAGA TCGCCATAGC TGTAGGGAAT
CCCTACGGGT ATCAGTATTC GTTAACGGCC GGTGTGGTGA GTGCACTGGG CCGAACGCTG
CGGTCGGAGT CGGGGCGGTT AATTGACGAC GTTATTCAAA CGGATGCGGC CCTTAACCCC
GGCAATTCGG GTGGTCCGCT GGTCAACTCG CAAGGCGATG TCATTGGTGT AAATACGGCC
GTAATTTTGC CCGCCCAGGG TATTTGCTTT GCCGTTTCCT CCAATCTGGC CGCATTGGTA
GCGGGCAAGC TGATTATGAC CGGACGCGTT CGACGGGGCT ATCTCGGCAT GGCCGGGCAG
TTAATTAACC TTACCGAGCG GATTATGCAG TACAATCAAC TGGCTGCAAA AACGGGTGTT
ATGGTCGTGA GTGTCGAACC GGACGGCGTG GCCGGTAATA GTGAACTTCG GGAAGGCGAT
ATCGTAGTGG GCTTTGCAGA ACAGCCCGTA ACATCGGTTG ACGACCTTCA TCGGCTGTTG
ACCGATGATA CCATTGGGCG GAAGCTACCG CTGATCGTTC TCCGCGGAAA TCTAAAGAAA
ACGATTTTCG TTACCCCCGG CGAATTAACA AAATAG
 
Protein sequence
MNMQFVALSS DTSQTGQETS PDSMLLDAYS NTVVNVAKKV SPSVVQIKVT KQLIASAPGR 
QRQSPLPGHP PGRDRMEGGS GSGFIISSDG YIITNNHVVA GALTIKVHLA DSREYDATLI
GRDPDTDIAV LKIYADSLKA IRFADSKHLQ VGQIAIAVGN PYGYQYSLTA GVVSALGRTL
RSESGRLIDD VIQTDAALNP GNSGGPLVNS QGDVIGVNTA VILPAQGICF AVSSNLAALV
AGKLIMTGRV RRGYLGMAGQ LINLTERIMQ YNQLAAKTGV MVVSVEPDGV AGNSELREGD
IVVGFAEQPV TSVDDLHRLL TDDTIGRKLP LIVLRGNLKK TIFVTPGELT K