| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2639 |
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| Symbol | |
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| ID | 8726386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3196730 |
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| End bp | 3198148 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003387454 |
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| Protein GI | 284037524 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.431626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0143862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGGCG ATTATCCGGA CCCATCCGTA GCCAAAATCG GGAATACATA CTGGGCCTCG
GCAACATCAT CGAACTGGTT TCCTGCTTAT CCAATGATGA AATCAGAAGA TCTTGTGCAT
TGGGAAACAG CAGGCTTTGT CTTTGAGAAA AAACCCGATT GGGCTGATTT TTACTTCTGG
GCCCCTGAGG TAGCCCCCGA AAAAGGAAAG GTTTATATTT ATTACACTGC CCATAAAAAA
GATGGCAATC TATGTGTGGG CGTAGCCAGC GCCAACAAAC CTGAAGGCCC CTATCGCGAT
CATGGTCCAT TAATTTGTCA GCCAGATGGT TCGATAGATG GCTTCCCCAT GCGTGACGAA
ACTGGCAAAT TATACCTTAT CTGGAAAGAG GACGGCAATA GTGTTGGTAA GCCAACGCCT
ATTTGGGCTC AGCCGCTTAA CGAGGAACGT ACCGCCCTAA CGGGAAGTAA ACAGGAGCTT
TTCCGTAACG ATTCCCCCTG GGAAGCCAAT CTGGTAGAGG GTGTGTCCAT AATACGGCAT
GGCGATTATT TTTATGCACT GTATGCCGCT GCCGGCTGTT GCGGACATGC CTGTACTTAT
GGCACCGGTG TTGCCCGCGC TAAAAGCTTG CTCGGGCCCT GGGAGAAATA TAAGCAAAAC
CCTATTCTGA CGGCAGATCC TATGTGGAAA TGCCCTGGGC ATGGAACACC CATTGAAAAA
GATGGGCGCC ATTATTTCTT ATATCATGCT TATAGCCAAC AGGGCGGGGT GTTTGTTGGC
CGTCAGGTGC TGCTGCGTGA GTTTCGCTTT ACCGACAATG GCTGGATCGA CTTTGAAAGT
ACAGCTAAGC CTATGGCATC AATGCCGGGA AATATCACAT ACGATTTTAA CGACGATAAT
CTTCCCAAAG CCTGGAACTG GTCGGTATTC AGACAACCCG TTACGCATCT GAGGAAAGGC
CAGTTACAAA TAAATGCTCA GCCAGATAAG TTTGGCGACT ACATTGGGCA TCGTACTACT
TCACCAAATT ATACCGCACA AACGACCATT CTTACCGAAA AGCAGGAAGC ACTTGCCGGA
CTTGCCATTA TTGGGGACGA TGATAACGCC ATCGGTATAT CCCTTCAGGG CACACAGTTA
TATGTTTGGA AACTTGAGAA AGGGAAAGAG CAGTCTCTTG GAAAAGCCCA GATTGAAGCC
GCTTCGCGGG TCAAGTTGCT GATTAAAGTT CAAAATGGCA GTAGCCTTTC GTTTTCATAC
AGCACAGATG GAACGACATT CAAACCCATT GGGGAGCGAT CTATCGATGG CTCTTATCTG
CCGCCCTGGG ATCGGGCCTT ACGGGTTGGC TTAACAGCGA AAGGGCCCAA TAGTCGGGTT
GCGCTATTTG ACGACTTCAC ACTCAACTCA GGACACTAA
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| Protein sequence | MAGDYPDPSV AKIGNTYWAS ATSSNWFPAY PMMKSEDLVH WETAGFVFEK KPDWADFYFW
APEVAPEKGK VYIYYTAHKK DGNLCVGVAS ANKPEGPYRD HGPLICQPDG SIDGFPMRDE
TGKLYLIWKE DGNSVGKPTP IWAQPLNEER TALTGSKQEL FRNDSPWEAN LVEGVSIIRH
GDYFYALYAA AGCCGHACTY GTGVARAKSL LGPWEKYKQN PILTADPMWK CPGHGTPIEK
DGRHYFLYHA YSQQGGVFVG RQVLLREFRF TDNGWIDFES TAKPMASMPG NITYDFNDDN
LPKAWNWSVF RQPVTHLRKG QLQINAQPDK FGDYIGHRTT SPNYTAQTTI LTEKQEALAG
LAIIGDDDNA IGISLQGTQL YVWKLEKGKE QSLGKAQIEA ASRVKLLIKV QNGSSLSFSY
STDGTTFKPI GERSIDGSYL PPWDRALRVG LTAKGPNSRV ALFDDFTLNS GH
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