Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2629 |
Symbol | |
ID | 8726374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3179886 |
End bp | 3181079 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | glycosyl hydrolase BNR repeat-containing protein |
Protein accession | YP_003387445 |
Protein GI | 284037515 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.5376 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCACT CCTTTCTACT GGCCGCCAGT CTTAGCCTGA GCCAGCCCCT CCCACCGGCA CAAGGCATTC GACCCGATAG CACTACCAAT CAACCCATTG CCGAAACGAC AGTTTTCCGG AATGGCGAAG GGGGCTATCT CTGCTACCGG ATTCCGGCCA TTGTAAAAAC ACCGACCGGA ACCCTGCTGG CGTTTGCCGA AGGGCGTCGG ACGGATTGCG GTGATTTTGG CGATGTCGAT ATTGTTTTGC GAACGAGTAA AGACAATGGG CAGTCCTGGA GTCCGATTCA GACCGTTGTC GACTTTGGCA CCATGCAGGC GGGTAATGCT GCGCCGGTGT TTGATGTAAG CGACCCGCGC TTTCCGGCTG GCCGACTGTT TTTGCTCTAT AACACGGGAA CGGATTCGGA GGCCAATGTC CGAAAAGGGC TGGCCATTCG GGAAGTGTGG TACAAAACCA GTACGGATGG CGGGCAAAGC TGGTCGGAGC CGGTAAACAT CACCACGCAG GTATCGCGCC CCAACAGGCC CAGCGTGAAC CCTGCCTATG CTTTTCCTGA AGACTGGCGC TCGTACGCCA ACACGCCGGG CCATGCGCTG CAACTGCAGA AAGGGCGGTA CAAAGGGCGG ATTTTTGTGG CGGCCAATCA TTCCGAAGGC CCGCCACAGC AACAATTTCG GGATTATCGG GCGCATGGTT TTTATTCCGA CGATCACGGC AAAACCTGGA AACTAAGCCC AACCATCCCC TATCCCGGCG GCAACGAAAG CACAGCCGCA GAAACGCCCG GCGGGGGCCT GCTGCTGAAC GCCCGGAACC AGTCGGGCGA TGTCAAAAAC CGCCTGTTGG CCTTCTCATC CAACGCGGGA GAAAGCTGGG AGCCGGTCGT TGTCGCTACT GATTTACCCG ACCCGGTTTG CCAGGGAAGT ATGCTCAATT ACCAGCCGCG CCGTGGGGCC TACGTGCTCC TGTTCTCGAA TCCGAACAGC CAGACCAGCC GTACCAATCT GACGGTTCGC GTAAGCCGGG ATGGGGGCAA AACGTGGTCA CAAGGCAACT CTATTTATGC CGGTTCGTCG GCCTATTCAG ACCTGGTTGT TCAGCAGGAC AACACAATCG GCGTACTGTA CGAGAAAGAC AACTACACCA AAATCACCTA CGCCCGTTTC CCCTACGACT GGCTGGTCAA GTAA
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Protein sequence | MLHSFLLAAS LSLSQPLPPA QGIRPDSTTN QPIAETTVFR NGEGGYLCYR IPAIVKTPTG TLLAFAEGRR TDCGDFGDVD IVLRTSKDNG QSWSPIQTVV DFGTMQAGNA APVFDVSDPR FPAGRLFLLY NTGTDSEANV RKGLAIREVW YKTSTDGGQS WSEPVNITTQ VSRPNRPSVN PAYAFPEDWR SYANTPGHAL QLQKGRYKGR IFVAANHSEG PPQQQFRDYR AHGFYSDDHG KTWKLSPTIP YPGGNESTAA ETPGGGLLLN ARNQSGDVKN RLLAFSSNAG ESWEPVVVAT DLPDPVCQGS MLNYQPRRGA YVLLFSNPNS QTSRTNLTVR VSRDGGKTWS QGNSIYAGSS AYSDLVVQQD NTIGVLYEKD NYTKITYARF PYDWLVK
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