Gene Slin_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2618 
Symbol 
ID8726363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3163416 
End bp3164804 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content56% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003387435 
Protein GI284037505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0778268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCA AACACAAACT CATTCTTTGG TTTTCGTCGT TGGTAGCCAG TATTCTGGTT 
ATTTTCTCGG TCTATGTGTA CAGCACCTAT GCCAGTTTCC GACAGCGTTC CATCGAAGAC
CGGCTAGCCC GAAAAGCCCG CGTTACAGAG CAACTGCTCA CGCTCAGGGG ATCGGTGGCG
GGCAGCGTGA TCACCTCCAT GCCCGAGCAG GTTGAGTTTG TCTATTCCCC GTCCGACAGT
TTAATTTATA GTAGCCAGCA GACCAACGAT TTTGTGGCCG AACCCGCTTT CCGAAGTAGG
GTTCGGCGGG AGCGGCTGAT TCGGTTTCAA TACGAAAGCC CCGGTCATTT GTACCCAAAA
GATGGCGTCG CGCTGACCTA CGCGGGCGTC TCGCCCTCGC CCGATGGCCG GGAGTATGTT
GCCATTGCCA CTGCCTACGA CCAGGACGGC TATCAGCGAC AAAAAGAGTT ACGCGACCTG
TTTATTGTTG GGAATGCGGT ATCCATCGGA CTGGTCCTTC TGATGGGGTA TTTGTTTGCC
CGTCAGGCCC TCAAACCACT GAACAACCTG ATCGACCAGA TCAACACGCC CGCAGCCAGC
TCGCTGACTT TCCGGCTGCG GGCCAACAAT CCACAGGATG AAGTAGGGGT ACTGGCGAAG
GCCTTCAATG AGCTGCTTAC CCGGCAGGAG CGGCTGGTCG ACAACCAACG TTCGTTTATT
GCTCAGGCGT CGCACGAACT GCGCACACCC CTGACTACCA TTAAAGGCTG GCTGGAAACG
TCAATCCTCT ACGATGCCGA CGCCGATAGC CTCAAGCGAG GTATGGCCCA GGCGGTTAAA
GAACTCGATA AACTTACCGC TCTGTCCAAC GGGCTGTTGC AACTGGCCCG CATTGATAGT
GTGGATGCCC AACTCGACCG GCAACCGCTC GAATTAGTCG AAGTCGTACT CGATGCGGCC
GATACATTTG GCAAACAGCA TAGCGGGCAA TCGTTATCGT TGCAACTCAG TGACGGGATG
CTCGAACAAA GCAGGCCCGC CATGATCCGG GGCAATGCGT ATCTGCTTCG AACGGCGTTG
CTGAATCTGC TGGATAATGC CGCCAAATAT TCGGATAGAC AGCCGGTGGC GCTTTGCCTG
GAAATGGATA CCGAAGAACG GGCGCGTATT CGAATCGAAG ATCGGGGTAT CGGCCTGACA
CCCGGCGAAG AAGACCGGGT GTTGCTGCCC CTGGTTCGCG GGTCTAACGT GCAGGCAATC
GATGGTTTCG GCATAGGCTT AACGCTGGCC CATCGGATCA TAGCCCTTCA TCAGGGGAAG
CTACGGCTGC GTCCCCGACC CGGAGGGGGA ACGATCACGG AAGTAATCGT TCCCTTACTG
TCAGCTTAA
 
Protein sequence
MQIKHKLILW FSSLVASILV IFSVYVYSTY ASFRQRSIED RLARKARVTE QLLTLRGSVA 
GSVITSMPEQ VEFVYSPSDS LIYSSQQTND FVAEPAFRSR VRRERLIRFQ YESPGHLYPK
DGVALTYAGV SPSPDGREYV AIATAYDQDG YQRQKELRDL FIVGNAVSIG LVLLMGYLFA
RQALKPLNNL IDQINTPAAS SLTFRLRANN PQDEVGVLAK AFNELLTRQE RLVDNQRSFI
AQASHELRTP LTTIKGWLET SILYDADADS LKRGMAQAVK ELDKLTALSN GLLQLARIDS
VDAQLDRQPL ELVEVVLDAA DTFGKQHSGQ SLSLQLSDGM LEQSRPAMIR GNAYLLRTAL
LNLLDNAAKY SDRQPVALCL EMDTEERARI RIEDRGIGLT PGEEDRVLLP LVRGSNVQAI
DGFGIGLTLA HRIIALHQGK LRLRPRPGGG TITEVIVPLL SA