Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2618 |
Symbol | |
ID | 8726363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 3163416 |
End bp | 3164804 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | histidine kinase |
Protein accession | YP_003387435 |
Protein GI | 284037505 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0778268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGATCA AACACAAACT CATTCTTTGG TTTTCGTCGT TGGTAGCCAG TATTCTGGTT ATTTTCTCGG TCTATGTGTA CAGCACCTAT GCCAGTTTCC GACAGCGTTC CATCGAAGAC CGGCTAGCCC GAAAAGCCCG CGTTACAGAG CAACTGCTCA CGCTCAGGGG ATCGGTGGCG GGCAGCGTGA TCACCTCCAT GCCCGAGCAG GTTGAGTTTG TCTATTCCCC GTCCGACAGT TTAATTTATA GTAGCCAGCA GACCAACGAT TTTGTGGCCG AACCCGCTTT CCGAAGTAGG GTTCGGCGGG AGCGGCTGAT TCGGTTTCAA TACGAAAGCC CCGGTCATTT GTACCCAAAA GATGGCGTCG CGCTGACCTA CGCGGGCGTC TCGCCCTCGC CCGATGGCCG GGAGTATGTT GCCATTGCCA CTGCCTACGA CCAGGACGGC TATCAGCGAC AAAAAGAGTT ACGCGACCTG TTTATTGTTG GGAATGCGGT ATCCATCGGA CTGGTCCTTC TGATGGGGTA TTTGTTTGCC CGTCAGGCCC TCAAACCACT GAACAACCTG ATCGACCAGA TCAACACGCC CGCAGCCAGC TCGCTGACTT TCCGGCTGCG GGCCAACAAT CCACAGGATG AAGTAGGGGT ACTGGCGAAG GCCTTCAATG AGCTGCTTAC CCGGCAGGAG CGGCTGGTCG ACAACCAACG TTCGTTTATT GCTCAGGCGT CGCACGAACT GCGCACACCC CTGACTACCA TTAAAGGCTG GCTGGAAACG TCAATCCTCT ACGATGCCGA CGCCGATAGC CTCAAGCGAG GTATGGCCCA GGCGGTTAAA GAACTCGATA AACTTACCGC TCTGTCCAAC GGGCTGTTGC AACTGGCCCG CATTGATAGT GTGGATGCCC AACTCGACCG GCAACCGCTC GAATTAGTCG AAGTCGTACT CGATGCGGCC GATACATTTG GCAAACAGCA TAGCGGGCAA TCGTTATCGT TGCAACTCAG TGACGGGATG CTCGAACAAA GCAGGCCCGC CATGATCCGG GGCAATGCGT ATCTGCTTCG AACGGCGTTG CTGAATCTGC TGGATAATGC CGCCAAATAT TCGGATAGAC AGCCGGTGGC GCTTTGCCTG GAAATGGATA CCGAAGAACG GGCGCGTATT CGAATCGAAG ATCGGGGTAT CGGCCTGACA CCCGGCGAAG AAGACCGGGT GTTGCTGCCC CTGGTTCGCG GGTCTAACGT GCAGGCAATC GATGGTTTCG GCATAGGCTT AACGCTGGCC CATCGGATCA TAGCCCTTCA TCAGGGGAAG CTACGGCTGC GTCCCCGACC CGGAGGGGGA ACGATCACGG AAGTAATCGT TCCCTTACTG TCAGCTTAA
|
Protein sequence | MQIKHKLILW FSSLVASILV IFSVYVYSTY ASFRQRSIED RLARKARVTE QLLTLRGSVA GSVITSMPEQ VEFVYSPSDS LIYSSQQTND FVAEPAFRSR VRRERLIRFQ YESPGHLYPK DGVALTYAGV SPSPDGREYV AIATAYDQDG YQRQKELRDL FIVGNAVSIG LVLLMGYLFA RQALKPLNNL IDQINTPAAS SLTFRLRANN PQDEVGVLAK AFNELLTRQE RLVDNQRSFI AQASHELRTP LTTIKGWLET SILYDADADS LKRGMAQAVK ELDKLTALSN GLLQLARIDS VDAQLDRQPL ELVEVVLDAA DTFGKQHSGQ SLSLQLSDGM LEQSRPAMIR GNAYLLRTAL LNLLDNAAKY SDRQPVALCL EMDTEERARI RIEDRGIGLT PGEEDRVLLP LVRGSNVQAI DGFGIGLTLA HRIIALHQGK LRLRPRPGGG TITEVIVPLL SA
|
| |