Gene Slin_2612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2612 
Symbol 
ID8726357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3154994 
End bp3156193 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content54% 
IMG OID 
Productaminotransferase class V 
Protein accessionYP_003387429 
Protein GI284037499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCCC AACCCACTAC CGTTCTCGAT ATTGCTCAAC TACGAGCCCA TACGCCCGGC 
TGTCAAGATA GCCTGTTTCT CAATAGTGCC GGCGCTTCTC TGATGCCGCA GCCCGTCGTT
CAGGCGATGC AGGATTATCT TCAGTTGGAA ACCCAAGTAG GCGGGTACGA GGCCGAACGG
GTATGCCAGA CACAGATTGA CCGGTTTTAC GAAGAAACAG CCCGGCTATT GAACACCCGG
CCCGAACATA TTGCCTTTGC CTACAGTGCT ACCCATGCTA CCTTTCAAGC CCTGTCAGCT
ATCCCGTTTC GGGAAGGTGA TACCATTCTG ACCACGACGA ATGATTACGT ATCCAACCAG
CTAGCTTTTC TGTCCATACA GCAGCGGTTA GGCATTAAAT TGCTACGGAT TCATGAACTG
CCCAATGGCG ACCTGGATTT GACGCATGCC GAGGAGTTGA TACGTACGCA CCGACCGGTT
CTGGTGGCGA TAACCCACAT CCCAACGAAC TCGGGTCTGG TGCTCCCGGC GGAGGACGTA
GGCAAACTAT GCCAGCAATA CGGAGCCTGG TATCTACTCG ACGCGGCTCA GTCGGTGGGG
CAGTTGCCGC TCGACGTTAC CCGCATTCAG CCCGACTTTC TGGTAGCCAC GGGTCGTAAG
TTTCTGCGAG GACCACGGAA TACGGGTTTT CTGTATGTAT CGGATCGGGT GCTGACAGCC
GGACTTTCTC CCTTGTTTAT TGATCGACGG GCCGCTACCT GGACTGAGCC AGACACCTAC
GCCTTACAAC CGGGTGCCCG CCGGTTTGAG CCCCAGGAGA TTTCGCTACT GAGTGTGGGG
TTGGCCGAAG CGGTCGGGTA TGCCAATCAG GTCGGTATAG AGGCCATTGC CCGGCAGAAT
CAACGGCTGA TGCACCGGCT CCGAACAGGG CTGGAACAAC TCGACGGTAT TACCTTACTG
GACTGGGGTT CCTGCCAAAG CAACCTACTA ACCTTTCACA TGGCTCGCCA GCCGTTAACA
GCGCTTGATG CCGCTTTGCG ACATGGTCGA GTGGTGTTTA CGGTGCAGTA CCCCAATTCT
GCCCTCATCG ATTTTAGGCG GAAAGGCATA GATTGGCTGG TTCGATTTTC GCCCCACTAT
TTTAACACGC TGGATGAAAT GGATGAAGTG GTCGATCTGA TGGCTCATTT TTTACGGTAA
 
Protein sequence
MQSQPTTVLD IAQLRAHTPG CQDSLFLNSA GASLMPQPVV QAMQDYLQLE TQVGGYEAER 
VCQTQIDRFY EETARLLNTR PEHIAFAYSA THATFQALSA IPFREGDTIL TTTNDYVSNQ
LAFLSIQQRL GIKLLRIHEL PNGDLDLTHA EELIRTHRPV LVAITHIPTN SGLVLPAEDV
GKLCQQYGAW YLLDAAQSVG QLPLDVTRIQ PDFLVATGRK FLRGPRNTGF LYVSDRVLTA
GLSPLFIDRR AATWTEPDTY ALQPGARRFE PQEISLLSVG LAEAVGYANQ VGIEAIARQN
QRLMHRLRTG LEQLDGITLL DWGSCQSNLL TFHMARQPLT ALDAALRHGR VVFTVQYPNS
ALIDFRRKGI DWLVRFSPHY FNTLDEMDEV VDLMAHFLR