Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2593 |
Symbol | |
ID | 8726338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3133672 |
End bp | 3134889 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | Glycosyl transferase, family 4, conserved region |
Protein accession | YP_003387410 |
Protein GI | 284037480 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.268685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTG ATTTATTACT TGCATACCTG CAAAATAAAT TCAATGATGA AGCATTTACG ATTGGCCTTT ATCAGTGCGT ACTGTCTTTT TTAGTTGCCT GTTTTGTGGC CGTGATTGCC ATTCCCGTTG TAATTAAGAT TTCGGAATTG AAATCGCTCA TGGAGAAGCC AGGCGAGCGC CGGTCGCACT CCACCCCAAC ACCAACTTTT GGTGGTATTG CCATCTTTGC CGCCATTTTA ATTGGCTATT TTCTATGGCC CAGTCTTGAC AGAACGGATA TTTACAGCAC CTACAGTACC AACCTGTCTA TCGTTGGCAT GACCATCCTG TTCTTTATTG GCATTAAGGA TGATCTGGTT GGTATCGACC CGGCCAAAAA GTTGATGTTT CAGGTGCTGG CAGCCATGAT TTTAATTCTG TTTGGCGATT TGCGGGTCGA TTACCTGTAT GGTATCATGG GTTTTCACCA CATACAGCCC GCAGTGGGTG TTCTGTTAAC CTGCTTCATC TTTATCGCCC TAACCAACGC TATTAACCTG ATTGACGGCA TTGATGGGTT AGCGGGCGGC ATTTCAACCA TTGCGAGTGC CACATTCGGC GGCTGGTTTT TGCTGACAAA CCACTTCACG ATGGCGTGTC TGGCCTTTAC GATGGCTGGT GCCTTGCTGG GCTTTTTACG ATTCAACTTC TCGAAGACCA GCAAAATCTT CATGGGTAAT ACCGGTTCGC TGATCATCGG CTTTATGCTG GCTTTCTTTG CGGTTCGGTT TGTTAACCTG AATGCGGCTT ACCGATACGA GCCAACTGCC TTCTTCAACG CCCCGATCAT TGCCATTGTC ATTTTGATCG TGCCGATTTT CGATACGTTA CGGGTCTTTC TGGTTAGAAT TCTGGCTGGC CGGTCGCCCT TTTCAGCCGA CCGCAATCAC ATGCATCATA TTTTGCTGGA TAATGGCCTG TCTCATGCCG GAGCAACGGC TGTGCTGTGC GGTATCTCCC TTTTTAACAC CGTCTTGTTT TTATTCCTGC ACCGTAATAT CTCAAATACC TTATCCCTTG TAATCCTGGG CTGTTTGTTC GGGTTGTATA TGATCGTGAG CTTTACGCTT AAGATGCGGG TGATGTACGT TTCCACTCAC CCCCGCCGGA GAAAGGCGGT TTTGCGGAGA GAGTTGCAGA ATGGAATTGT CGGACGACGA ATTGTTGACT ATTTATAA
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Protein sequence | MNIDLLLAYL QNKFNDEAFT IGLYQCVLSF LVACFVAVIA IPVVIKISEL KSLMEKPGER RSHSTPTPTF GGIAIFAAIL IGYFLWPSLD RTDIYSTYST NLSIVGMTIL FFIGIKDDLV GIDPAKKLMF QVLAAMILIL FGDLRVDYLY GIMGFHHIQP AVGVLLTCFI FIALTNAINL IDGIDGLAGG ISTIASATFG GWFLLTNHFT MACLAFTMAG ALLGFLRFNF SKTSKIFMGN TGSLIIGFML AFFAVRFVNL NAAYRYEPTA FFNAPIIAIV ILIVPIFDTL RVFLVRILAG RSPFSADRNH MHHILLDNGL SHAGATAVLC GISLFNTVLF LFLHRNISNT LSLVILGCLF GLYMIVSFTL KMRVMYVSTH PRRRKAVLRR ELQNGIVGRR IVDYL
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