| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2576 |
|---|
| Symbol | |
|---|
| ID | 8726321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3115128 |
|---|
| End bp | 3116348 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003387393 |
|---|
| Protein GI | 284037463 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.731131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.452849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAAGC TGCTGTTAAT AGGCCACGAT GCCAACCGCG CCGGTGCACA AATTGTGCTG
CTCAACCTGA TGCGGTTGTT GAAGCAGGAA GGCCTCTCCA TGCATTTACT GCTGGGAGAA
GGCGGTCCGC TACTCGACGA CTACCGGGCA ATTTGTCCGG TTACTATCTG GCCCGCCCCC
AGCCCATACG TAGTCGGAGC ACTCGCCGAT AAAGTGCTGT TTAAAGTAGG ACTTTGGGAG
CGATTTCAGG AGCGGCAGCG GGTAAGTCGG CAGCAGGCTA TACAGGCGGA GCTTAACCTC
GATTCGTTCG ATCTGGTGCT CGTCAATACC GTTACCAGTA GTCGGTGGTT TAGTCAACTG
ACGATACCCG CCCGCATGCC TGTCGTCACC TTCGTGCATG AACTCGACAT GTCGGTTCGG
ATATACACCC GCCCCGACGA ACTGGCGTTG CTGCTCAACA GAACGACGCA GTTGCTGGCG
GTATCGAAAG CGACTGCCCG GTATTACGAA CGGCAGCACG GCTTCGATCC GGCCCGCATT
ACGCTCTATA CACTAATCGA CACCCCTACT CTGTCCCACA CGGTTCAACA GGCCCGCGAG
CAGCCAAGCC CTTATTCGTC GCTGGGTTTG CCGGATAACG CCCTGATCGT GGGCGGGTGC
GGCAATGCCG AATGGCGAAA AGGCAACGAC CTCTTTATCA CACTGGCCCG GCAGGTAATT
GGGCGCGTTC AGAACAACAC AACAGCCCAA GAAGCGTCAA TTGATCGACC TGTTCATTTT
GTCTGGGTTG GCGTGCCGCC AGGAAACCTG CGGGACGATC TGCTGGTCGA TATTCGCAAA
GCAGGGCTTG GTGACTGCGT TCATCTGATT CCGCCTACGC CGGAGGTACT GCGTTACCTG
AGTCGGTTCG ACGTTTTCGT GCTCTGCTCC CGCGAAGATC CCTACCCGCT GGTTGTGTTT
GAAGCGGGCT TAAGTGAAGT GCCGGTGGTC TGTTTTGACG ATGCCGGTGG CTCGCCCGAA
CTAGTAGAAA CCGACGGTGG CTATGTGGTG CCTTACCTCG ACCTCGACGC CATGAGCAGC
CGTGTTATCG ACCTGCTCCG GGAGCCGGAT TTACGAAAAA GGATGGGGCA GCGACTGGCT
CAAAAAATAC TTGAACGCCA TCCGGCTCAG CAAAGCGTCG AAACTCTTGT AACTTTGTTC
GAGAAACTGA CTCGGCAATA G
|
|---|
| Protein sequence | MKKLLLIGHD ANRAGAQIVL LNLMRLLKQE GLSMHLLLGE GGPLLDDYRA ICPVTIWPAP
SPYVVGALAD KVLFKVGLWE RFQERQRVSR QQAIQAELNL DSFDLVLVNT VTSSRWFSQL
TIPARMPVVT FVHELDMSVR IYTRPDELAL LLNRTTQLLA VSKATARYYE RQHGFDPARI
TLYTLIDTPT LSHTVQQARE QPSPYSSLGL PDNALIVGGC GNAEWRKGND LFITLARQVI
GRVQNNTTAQ EASIDRPVHF VWVGVPPGNL RDDLLVDIRK AGLGDCVHLI PPTPEVLRYL
SRFDVFVLCS REDPYPLVVF EAGLSEVPVV CFDDAGGSPE LVETDGGYVV PYLDLDAMSS
RVIDLLREPD LRKRMGQRLA QKILERHPAQ QSVETLVTLF EKLTRQ
|
|---|
| |