| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2575 |
|---|
| Symbol | |
|---|
| ID | 8726320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3114447 |
|---|
| End bp | 3115100 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | transferase, putative |
|---|
| Protein accession | YP_003387392 |
|---|
| Protein GI | 284037462 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.211269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.535358 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAAG TGATCATCTT CGGGGTTATG GACACGGCAG AGCTGGCCCA TTTCTACCTC
ACCCACGATT CGGAACACGA CGTAGCGGCT TTCACCGTAA GTCGTGAATA CATGACCGGC
ACTGAATTTC AGGGGTTACC ACTGGTAGCG TTCGAAGACG TAGAAACGCT GTTTTCTCCA
CAGGAGTACA AGTTTTTTGC GCCTATGACT GGCCGGAATA TGAATCGTAA CCGGGAGCGT
ATCTACCTCG AAGCCAAAGC CAAAGGGTAT GAGTTCATTT CCTATATCAG CTCGAAAGCC
ACCCTGTTTG GCAACCAGAT TGGGGAGAAC TGCTTCATTC TGGAAGACAA CACCATCCAG
CCGTTTACGA CCATTGGCAA TAATGTGGTT CTTTGGAGCG GCAACCATAT CGGGCACCAC
GGGCAAATAA AAGACCATGT ATTCTTTACC TCCCACGTGG TTATGTCGGG CCACTGCGTC
ATTGAGCCGT ATTGCTTCTT TGGGGTAAAC AGCACCATTC GGGATTTCCT GCACATCGCA
ACCGGAACCC TTGTCGGCAT GGCCTCTGCC ATTTATAAAG ACACCGACGA ATGGGGTCTG
TATCTCGGCA ACCCGGCCAA AAAACTTCCC AAGCCCAGTT ACGAAGCGTA TTAA
|
|---|
| Protein sequence | MAKVIIFGVM DTAELAHFYL THDSEHDVAA FTVSREYMTG TEFQGLPLVA FEDVETLFSP
QEYKFFAPMT GRNMNRNRER IYLEAKAKGY EFISYISSKA TLFGNQIGEN CFILEDNTIQ
PFTTIGNNVV LWSGNHIGHH GQIKDHVFFT SHVVMSGHCV IEPYCFFGVN STIRDFLHIA
TGTLVGMASA IYKDTDEWGL YLGNPAKKLP KPSYEAY
|
|---|
| |