Gene Slin_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2573 
Symbol 
ID8726318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3111518 
End bp3113602 
Gene Length2085 bp 
Protein Length694 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387390 
Protein GI284037460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0435941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.40806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCT TATACATTAT TCCCCTTATT CTGTTTGTCA TTTATGTCGG ACGGCTTGCC 
TCGCAGATTT GCCGACGCTC CCTGACAGAA TGGTGGCTGA CAACATTTTT GCTGGGTGCC
GGTAGCGTTA TTTTTACGGG CTTCGTGCTA TCCGCCCTGT ATCTGACGGC CAACGCACCG
GTTTGGGCGG GTTCGGTATT TATTACGGCA ACGCTTCTCG GCAAACTGTT AAGTCGCCTG
TCTGGCCAGA ATACCGGTTT TTCGGTCAGA AAACTCGTTG AGGAACGTTT TCAAACGGGC
AAGAACTGGT TCGCCGAGTT GTCAGCCTAC TCCCGCTTTC TGTTCATACT GCTCTTCAGC
ACAGTAGGCA TCATTGCCGT CACTAACCTC CTGCTGGTAT TCTTTACCGT TCCTAATGAA
TGGGATAGCA TGACCGGCCA CCTGAACCGC GTGATGCAAT ACATACAGCG GGGTACCATG
CGTCATTTCG GGGGAACGAA CTGGAACATG GATACGTATC CGAAGAGCGT TTGTACCCTT
CAGATTTATT CGTTTCTGAT GACCGGCCAT TTTGAGAATG GCTTCAAATT TATTCATCAC
CTGAGCTACT GGACAGCCAT TGTTGCCGTT TTTGGTATTG TACAGCGCAT TGGTCATAAC
CGGCTATCAG CTAGTTTTTT CTGTGCGTTG GCGTATGCCC TGCTTCCCGA TTTTCTGATG
CAGGCGATCA CCACCGAAAC CGACATTGTT CTGACTGCCT ACCTAAGCGT ATTGCTATAC
ATGCTGTTCA CGTACCGCAC GATCGGTGTG CAAACGGCCG ATAGCCGGTA TCTATACCTG
GCAGGTATGG CGTTTGGGAT TGCGTTTGGA CACAAAATCA CCTTTGCCTT GCTGTTACCT
TCCGTATTCG TCATCATGAT TTATACGGTT TTCTTGTCGC GTTCGTGGAC TATAACGTTC
GGGCGGGTAT GGCGTCTGGG GCTGGCAATC GGGGTTGGAG TTTGCCTGTG GACACTCCCG
ACCGGCTACC TCAAAAACAT TGAAGTCTTT GGTCACCCGA TTGGTCCTCC AACGGCCCTT
AAACACCAAT CTGTGGAGCG GGCTGGTTCT CTCTCCAACT TACTTGAACA GGGAAGCCGC
AATGTGGTTC GGTACGCCTA CGACCATGTG AATCTGGACG GCATCCGAAA CGTTAAAGCC
GGTGCCGACC TGAACCATGC CATGCGCAAG CCGCTGGTAT TGCTGGAAGA CAAACTGCAT
ATGCGGCTGG ATGAAGAAAC CGACTTTTCG ATTCAGGTGT TTGCCTTCGA TCGAAAGTTT
GTGTTTTATA ACGCCAATCC CTATTGGGGT ATTTTCGGGT TTGGGTTGAT CTTGCCGCTA
TTGGTGCTGG TATTGGTGGG CTTCATTCGC TCAACCCCGC ACATCTATTT AGGGATTGCC
CTTTTGCTCC ATTTTGCAGC TTTATCCTAT TCGGCCCCAT ATGACCCCTT CAAAGGACGT
TATTTTATAG AAACAGGGCT GTTCGGTGTT ACCTTTCTGG CACTGTTGTT TCTCCACCCA
CGCGCAACCG TCGATGTACC CAACCGACCG ATCTGGAAAG GTTATGTTGC TCTCGTTACG
GTAGTGGGCT GCCTGTCGGC ACTCATGTGC GTCTTCCTGA ACACCCGTGC GCTACCATTC
GCCTGGACGG GGCCCGATGG CATTCCTTTC CCGTCGGCAT TCACATCTGA CAGAATCCGG
CAGATAACCA TTGGCCGACC TGACACCTAC ATTCCCTACA AACGCTTCGA TGAGTTGGTA
CCCGATAGTG CGACCGTCGC GCTGGCAACC ATCAACGATG ACTATGAGTA CCCGCTCTAC
GGACCCAAAT TATCCCGTCG ATTAATAGCT ATCAACCCGT TTGAACAAGG ACTTAAACCA
ATTCCGAAAG AGGCCGATTA CCTGTTTTTC GACAAGAGCG TTATTTCACC CCAACCCGGC
GACATACGTC TGGGTACCGA TACTACTCTG CGCGCCAGAA TGATCGTACC GGGAGAAGAT
TATTATTTAC GGAAACTGAA AAAAGGAGTT AGGGGCGAGA AGTGA
 
Protein sequence
MSSLYIIPLI LFVIYVGRLA SQICRRSLTE WWLTTFLLGA GSVIFTGFVL SALYLTANAP 
VWAGSVFITA TLLGKLLSRL SGQNTGFSVR KLVEERFQTG KNWFAELSAY SRFLFILLFS
TVGIIAVTNL LLVFFTVPNE WDSMTGHLNR VMQYIQRGTM RHFGGTNWNM DTYPKSVCTL
QIYSFLMTGH FENGFKFIHH LSYWTAIVAV FGIVQRIGHN RLSASFFCAL AYALLPDFLM
QAITTETDIV LTAYLSVLLY MLFTYRTIGV QTADSRYLYL AGMAFGIAFG HKITFALLLP
SVFVIMIYTV FLSRSWTITF GRVWRLGLAI GVGVCLWTLP TGYLKNIEVF GHPIGPPTAL
KHQSVERAGS LSNLLEQGSR NVVRYAYDHV NLDGIRNVKA GADLNHAMRK PLVLLEDKLH
MRLDEETDFS IQVFAFDRKF VFYNANPYWG IFGFGLILPL LVLVLVGFIR STPHIYLGIA
LLLHFAALSY SAPYDPFKGR YFIETGLFGV TFLALLFLHP RATVDVPNRP IWKGYVALVT
VVGCLSALMC VFLNTRALPF AWTGPDGIPF PSAFTSDRIR QITIGRPDTY IPYKRFDELV
PDSATVALAT INDDYEYPLY GPKLSRRLIA INPFEQGLKP IPKEADYLFF DKSVISPQPG
DIRLGTDTTL RARMIVPGED YYLRKLKKGV RGEK