Gene Slin_2569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2569 
Symbol 
ID8726314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3106899 
End bp3108020 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387386 
Protein GI284037456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.028657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.698022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTA CAAACTTATC TGATACAAAC AACCCGAACC ATCTGTCAGC GGCTCGTCCG 
TTACCACCCG ATCAGATTTC GCCCAAGTCA GTGGTAATAA GCGTTTTTCA GTTGAAGTAT
GTATTCATGC GCAACTGGAA GGTACTTCTG CTTCTGGTAT GTCTGGGTGG CCTTATTGGG
TTCATCTACG ACTTATTTCA TAAGACAAAG GTTACCTATA CCGGCACCAT CATGTTTAAC
CTGGGCGGCA GTTCGTCGGG GGGTGGATTC GGTGGTGAAT TGGGCCAGTT GGCGGGCGCG
TTTGGCCTAA GCTCAGGGGC TCCCGATGCC AACATATTTG TGGGCGACAA CTTCCTCATT
TATGCCAAAT CAAGACCCGT TGTCGAAAAG ACGTTGATGC AGACTGATAC TATCAACGGT
AAAGACACCC TGCTCGTCAA TTACTATATT CGCCACAGCG GTATTCGCGA CCAGGAATGG
GAAGACAACG ATTCATTGCG AGCCTTTTAT TTCAAACGGG CCAAATTACC CAGTGAATAC
ACCAAGACGG AACAACTGGT GATGTCGGAC ATTTATGCCC GGATTGAGGG TGAAATGGCG
GTTAAGCAAC CGGAACGAAA ATCGTCGTTT ATGGAGCTTA GCTGTTTTAT GGAAAATGAG
CAGCTGGCGG CCACCTTTCT AACCAATCAC CTCAAAACCA TTGAGCAGGA TTACCAGAAA
AAGCAGACGA AAAAAACCCG CGAAATGTAT GACCTGCTCA TAGACAGAGT GGACTCCCTT
CAGTCACGTT TGACAGGTAC AGAAAATAAA CTGGCCCAGT ACATGGACCA AAACCAGCAG
GTGGTTGTCG CACAGGGCCG TATGACGGAA AATAAGCTGA CACGGAATTC CGGCTTCCTG
ACTACCCTGT ATTATCAGGC ACTCCAGCAG GCCGATAACA TGCGCTTATC TCTAATCCGC
GAGACGCCGT TGTTTACCAT CATTAAACCC GTTTATTATC CACTCCACAT AGACACGATT
GCAACGGCTG GCCTACAGAT TGGTATAATT GTTGGTCTGG TGTTGTCTAT CCTGGTTATT
TTTCTGCGAG AAACCTACCG CTCCGTAATG CGGGAAGCTT AA
 
Protein sequence
MASTNLSDTN NPNHLSAARP LPPDQISPKS VVISVFQLKY VFMRNWKVLL LLVCLGGLIG 
FIYDLFHKTK VTYTGTIMFN LGGSSSGGGF GGELGQLAGA FGLSSGAPDA NIFVGDNFLI
YAKSRPVVEK TLMQTDTING KDTLLVNYYI RHSGIRDQEW EDNDSLRAFY FKRAKLPSEY
TKTEQLVMSD IYARIEGEMA VKQPERKSSF MELSCFMENE QLAATFLTNH LKTIEQDYQK
KQTKKTREMY DLLIDRVDSL QSRLTGTENK LAQYMDQNQQ VVVAQGRMTE NKLTRNSGFL
TTLYYQALQQ ADNMRLSLIR ETPLFTIIKP VYYPLHIDTI ATAGLQIGII VGLVLSILVI
FLRETYRSVM REA