Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_2569 |
Symbol | |
ID | 8726314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 3106899 |
End bp | 3108020 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003387386 |
Protein GI | 284037456 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.028657 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.698022 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCTA CAAACTTATC TGATACAAAC AACCCGAACC ATCTGTCAGC GGCTCGTCCG TTACCACCCG ATCAGATTTC GCCCAAGTCA GTGGTAATAA GCGTTTTTCA GTTGAAGTAT GTATTCATGC GCAACTGGAA GGTACTTCTG CTTCTGGTAT GTCTGGGTGG CCTTATTGGG TTCATCTACG ACTTATTTCA TAAGACAAAG GTTACCTATA CCGGCACCAT CATGTTTAAC CTGGGCGGCA GTTCGTCGGG GGGTGGATTC GGTGGTGAAT TGGGCCAGTT GGCGGGCGCG TTTGGCCTAA GCTCAGGGGC TCCCGATGCC AACATATTTG TGGGCGACAA CTTCCTCATT TATGCCAAAT CAAGACCCGT TGTCGAAAAG ACGTTGATGC AGACTGATAC TATCAACGGT AAAGACACCC TGCTCGTCAA TTACTATATT CGCCACAGCG GTATTCGCGA CCAGGAATGG GAAGACAACG ATTCATTGCG AGCCTTTTAT TTCAAACGGG CCAAATTACC CAGTGAATAC ACCAAGACGG AACAACTGGT GATGTCGGAC ATTTATGCCC GGATTGAGGG TGAAATGGCG GTTAAGCAAC CGGAACGAAA ATCGTCGTTT ATGGAGCTTA GCTGTTTTAT GGAAAATGAG CAGCTGGCGG CCACCTTTCT AACCAATCAC CTCAAAACCA TTGAGCAGGA TTACCAGAAA AAGCAGACGA AAAAAACCCG CGAAATGTAT GACCTGCTCA TAGACAGAGT GGACTCCCTT CAGTCACGTT TGACAGGTAC AGAAAATAAA CTGGCCCAGT ACATGGACCA AAACCAGCAG GTGGTTGTCG CACAGGGCCG TATGACGGAA AATAAGCTGA CACGGAATTC CGGCTTCCTG ACTACCCTGT ATTATCAGGC ACTCCAGCAG GCCGATAACA TGCGCTTATC TCTAATCCGC GAGACGCCGT TGTTTACCAT CATTAAACCC GTTTATTATC CACTCCACAT AGACACGATT GCAACGGCTG GCCTACAGAT TGGTATAATT GTTGGTCTGG TGTTGTCTAT CCTGGTTATT TTTCTGCGAG AAACCTACCG CTCCGTAATG CGGGAAGCTT AA
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Protein sequence | MASTNLSDTN NPNHLSAARP LPPDQISPKS VVISVFQLKY VFMRNWKVLL LLVCLGGLIG FIYDLFHKTK VTYTGTIMFN LGGSSSGGGF GGELGQLAGA FGLSSGAPDA NIFVGDNFLI YAKSRPVVEK TLMQTDTING KDTLLVNYYI RHSGIRDQEW EDNDSLRAFY FKRAKLPSEY TKTEQLVMSD IYARIEGEMA VKQPERKSSF MELSCFMENE QLAATFLTNH LKTIEQDYQK KQTKKTREMY DLLIDRVDSL QSRLTGTENK LAQYMDQNQQ VVVAQGRMTE NKLTRNSGFL TTLYYQALQQ ADNMRLSLIR ETPLFTIIKP VYYPLHIDTI ATAGLQIGII VGLVLSILVI FLRETYRSVM REA
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