Gene Slin_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2548 
Symbol 
ID8726293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3078516 
End bp3079517 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387365 
Protein GI284037435 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0689469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0687317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTC TTCGGTACAT AATTATTCTT TTTGCGCTCC TCCTGTGGAG TGGAGGCATG 
TCGAGCACGG TTTCTCACTG GCTTTATCAG GTTGGCATCA TTGCCGACGA CTATCGGTTT
GGCGACCTAT ATCGCCTTTC TACGCTGCCC CAATTTAAAG AACCAAAACC CGTTTGTTCA
CCGTCCAATC GGTCGACCGA CACAGCATCC ACGCACCTTT ATCTGATCGG CGATAGCTTT
TCTGAACCCG AACGGCTCAG TCAGTACGAT TTCCGGGTAA GCCATTATCA GCGGGTAGCC
TGGGACTTTC GGCAACGGGC GCAACTAGAC CCGACCAAAC GGAATGTCTT ACTGATTGAA
TCCATTGAAC GGCATGTGCG GGAGCATTTC GCCGGAAACG TACAGGAGCT TGTTGTTGAG
AAAGATACCG CTCAACATCC CAGCCTGCGC CCGTCTTTCT GGCAACGATT AAATAACGAG
TTTCACCGGA GCGACGTGGA GGAGCGGCTC GAATCGACCC TGTTCAGCCG CGATTGGGCC
TTTTGGTTTA AAGAGCTGAA AGCCAGCCTG ACGCTAAATT GGTTCGACCG GGCAAGTAGC
AGCGTGAGCC TTTCTAAAGA CAGACAACAT GTCTTTCTGC ACAGTGACAC CGATACGGGC
AAACCATTAA ATTCGTCGTT TTCGAGCCTG ACTGATCCCG AGGTAAACAC GCTTGTCGAC
AGTATTAATT CAGTCGCCAG CCGATACAAA CAGCTTGGTT TCGATGCGGT TTATTTGTCG
ATCATCCCTA ATAAAGCCAG TATTCTGGAA CCTGAGCGGG CGGCCTATAA TCACCTCATT
GAACGTATCC AGGCAAGTCC GGCTTTGCAG GTGCCCTTCA TCAATACCTA CGAAGCGTAT
AAAAATAGCT CTGTACCACC TTATTTGAAA AGTGATACGC ACTGGAGTTG TGAAGGGCGG
GCGCTTTGGC TTGAGCTGGT ACGGAAGAAA GCACAAATCT AG
 
Protein sequence
MRFLRYIIIL FALLLWSGGM SSTVSHWLYQ VGIIADDYRF GDLYRLSTLP QFKEPKPVCS 
PSNRSTDTAS THLYLIGDSF SEPERLSQYD FRVSHYQRVA WDFRQRAQLD PTKRNVLLIE
SIERHVREHF AGNVQELVVE KDTAQHPSLR PSFWQRLNNE FHRSDVEERL ESTLFSRDWA
FWFKELKASL TLNWFDRASS SVSLSKDRQH VFLHSDTDTG KPLNSSFSSL TDPEVNTLVD
SINSVASRYK QLGFDAVYLS IIPNKASILE PERAAYNHLI ERIQASPALQ VPFINTYEAY
KNSSVPPYLK SDTHWSCEGR ALWLELVRKK AQI