Gene Slin_2545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2545 
Symbol 
ID8726290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3073489 
End bp3074649 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content49% 
IMG OID 
Productacyltransferase 3 
Protein accessionYP_003387362 
Protein GI284037432 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0713139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0487164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTAACC AATCGTCTAT ACCAACCGCT GCCCCTGCCC GTTCAACGCT GAATCACCTT 
CGGCAGCTGG ACGGTATTCG ATTCATTGCG GTGGGCATGG TCCTGTTCGA CCATTGGATG
GTTGGCCGGG CCGATGGGCT GGCATTGGGG GCATTGGGCG TTACGATCTT TTTTGTGCTA
AGCGGTTTTC TGATAACCCG TATCCTGCTG TCGAGCAAAG ACAAGCTCAG CAACCAGCCA
AACGGAGGGT TAGGAAAGTA CCTCAAGACG TTCTACATCC GCCGTACCCT GCGTATTTTC
CCAATTTATT ACCTGACACT CTTTGTTCTC TATCTGATTA ACGAACCACC CGTCCGCCGA
ACATTTGCGT GGCTGGCTCT TTATGCATCC AACATATACA TAGCGCGTTA TGCTACCTGG
ATGGGCACCG TCGATCACCT GTGGTCGTTA GCCGTTGAAG AGCAGGTGTA CCTTATTTTT
CCGTTACTCC TCTTTTTCAT GCCACGCCGG TGGGTTCCGC TCACCTCCAT ACTTATGATT
GTTGGCAGCG TTGGGTTACG GTACATCCTG TTTCACAAGC AGTTGCCCTG GTTTATCGGG
TACGTATCCA TGCCCACCTG CCTGGATGCG TTTGGTCTGG GTATGCTGAT GGCGTTTACC
TGGCTGTATC GACGCGAGTG GTTCACCCGC TTGTTTCAAT CGTCAACCTG GGTTATTGTC
AGCCTGCTGG CGTTTCTGGG AGCAGTCTGG CTCACAAACT GGCTGGCCCA GACACCATCA
ATCGGGTATC ACAATGTGGT GGCCGATGTG TGGGAACGGC TGATTGGCTC TCTGTTTGGC
TTTTTCCTCA TTGGCCGGGC GGTTGTTGGA TTCAGGGGCC CAATGAAATG GGTTCTCGAA
AATCCGGTCA GTCAGTACAT GGGCCGCATC AGTTACGGAC TATACCTTTT TCATAATTTC
GTCTTTAACT TTTTTCACAC CCAACCAACT CATTTTACGG TTCGAGCCTG GAAACGCCTT
TCCGAAATGA TGCCTTTCCT GACAAGTTCC TACTTTTTCC AATTTTCATT TTATCTTGTA
TTAACCGTCG TACTGGCAAC AATTTCTTGG TTTTTGATTG AAAAACCGAT TAATAATCTG
AAAGATCGCT TTTCATATTA A
 
Protein sequence
MSNQSSIPTA APARSTLNHL RQLDGIRFIA VGMVLFDHWM VGRADGLALG ALGVTIFFVL 
SGFLITRILL SSKDKLSNQP NGGLGKYLKT FYIRRTLRIF PIYYLTLFVL YLINEPPVRR
TFAWLALYAS NIYIARYATW MGTVDHLWSL AVEEQVYLIF PLLLFFMPRR WVPLTSILMI
VGSVGLRYIL FHKQLPWFIG YVSMPTCLDA FGLGMLMAFT WLYRREWFTR LFQSSTWVIV
SLLAFLGAVW LTNWLAQTPS IGYHNVVADV WERLIGSLFG FFLIGRAVVG FRGPMKWVLE
NPVSQYMGRI SYGLYLFHNF VFNFFHTQPT HFTVRAWKRL SEMMPFLTSS YFFQFSFYLV
LTVVLATISW FLIEKPINNL KDRFSY