| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2539 |
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| Symbol | |
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| ID | 8726284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3063073 |
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| End bp | 3065163 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_003387356 |
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| Protein GI | 284037426 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.173328 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCGG AAGAACAGAT CATTGACCTA ACGAATCGAC TGAATCAGTA CAATTTTCAA
TATTACCAGA ATAGTATCTC GGAAGTAGAT GACTTTACCT TCGATAAGTT ACTTGCCGAC
TTAACGGCTC TGGAAAATCA GTACCCTGAA TTTAGACAGC CCGACTCGCC AACGGCCCGG
GTGGGGGGTA CAATCAGCAA GGAATTCAAG ACCGTTTATC ACCGCTTTCC CATGCTTTCG
CTGGGGAATA CGTATTCTGA AGAAGACCTC ATCGAGTTCG ACAAACGTGT GCAAAAAGGC
CTCAACGGGC AAACGTACGA ATACATCTGT GAGCTGAAAT TTGATGGTGT AGCCCTCAGC
CTGACCTACG AAAATGGGGT ACTGGTACAG GGTGCAACCC GTGGTGATGG CGTTCGTGGT
GATGATATTA CCAACAATAT CCGAACCATC CGAACGGTCC CTCTGCGAAT AGGCGCTGGA
CACAAGGCCA CGCATACGCA ACCAGAATCT GCCCCAGCGG TGGCCGCACT TCCAGCCCTT
TTCGAAGTGC GGGGCGAAGG ATTTTTGCCG TTGGCGGAGT TCGATAGAAT CAACAAGGAA
CGGGAAGATA TTGGTGAGCC GTTGCTGGCA AACCCGAGAA ATGCAGCCTC CGGAACGTTT
AAGCAACAGG ACTCCGGTGC GGTCGCCAAA CGTCGGCTCG ATTGTTATCT GTATTCGTTT
TTATCCGATA CAGATATTTT TCAAACCCAC GAAGAGAGCC TGGTGGCCAT GAATGCCTGG
GGCTTCAACG TGTCGCCAAC CTGGCGGAAG TGTACCGACA TTCAGGAGGT GATGGCGTAC
ATTAATGAAT GGGAAACCAA ACGCTTCGAT CTGCCACTTG GCACCGATGG CATCGTGATT
AAGGTGAATC GCTACGACCA GCAACGAGAC CTTGGCTACA CCGCCAAAAG CCCGCGCTGG
GCCATCGCCT TTAAATATAA AGCAATGGCC GCCAGTACCG AACTTAACGG CATTCAGTAT
CAGGTGGGCC GGACGGGAGC CGTCACGCCC GTTGCGCTGC TGACGCCCGT ATTACTGGCC
GGAACAATCG TGAAGCGGGC TTCCCTGCAC AACGCCAACG AAATTGAGCG GCTGGGCGTA
ATGATGCACG ACACCGTTTT TGTGGAAAAA GGAGGGGAAA TCATTCCGAA AATAACGGGT
GTCGACCTGA ACCGGCGCAC CGATAAGAGC CAGCCGATTG TTTATCCTAC CACCTGCCCC
GCTTGTGGAA CGGCACTTGT CCGGAAAGAA GGGGAAGCGC ATTTTTATTG CCCCAATGAG
CAGGGATGCC CGCCCCAGCG GCAGGCCCGA TTTGAACATT TCATTCAGCG ACGGGCTATG
AATATCGAAA GCCTGGGCGA GGGGAAAATT GAACTCCTCA TCGACCGTGG GCTGGTGCAG
ACCCCCGCCG ATTTGTATGA CCTGAAGGCG ACGGACCTGC TGGGTATCGA AAAGGTGTTT
CTGGTGGAGG AGACCGGCAA AAAACGCGTT GTCAGCTTCC GCGAAAAAAC GGTTGAGAAC
ATACTCACGG CCATAGAGCG CTCAAAATCG CAGCCTTTTG CCAATGTTTT GTTTGGGTTG
GGCATCCGTT ACGTGGGCAA TACCACCGCC GAGAAGCTGG TTGATTACTT CGGGTCGATG
GATGCCATTA TGAATGCCAC GCAGGAGCAG TTGCTGGCCG TTCCGGATAC GGGTCCGCGT
ATTGCCGAAA GCGTCGTCGC CTGGTTTGGC GATACCGCCA ACCAAGAGTT TGTGGAACGG
CTCAGAGCGG CAGGACTACA GTTTGTCGGT GAGAAAAAAG TAGTGGAGCA GGAAGGTGAC
TCGTTAACGG GCAAGACATT TCTGTATACC GGAACCTTCG CCAATTTTAG TCGCGAGGAG
TTGGAATCCC GGATTGAGGC CAATGGTGGT AAACTGCTCA GTGGCATCTC GAAAAAGCTG
AACTACCTGA TCGTAGGCGA AAATGCCGGG CCATCTAAGG TTGAAAAAGC GAAGAAACTA
AACGTTCCCA TGATTGGCGA AGACGAGTTT ATGGCAATGC TGGTTGTATA A
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| Protein sequence | MNPEEQIIDL TNRLNQYNFQ YYQNSISEVD DFTFDKLLAD LTALENQYPE FRQPDSPTAR
VGGTISKEFK TVYHRFPMLS LGNTYSEEDL IEFDKRVQKG LNGQTYEYIC ELKFDGVALS
LTYENGVLVQ GATRGDGVRG DDITNNIRTI RTVPLRIGAG HKATHTQPES APAVAALPAL
FEVRGEGFLP LAEFDRINKE REDIGEPLLA NPRNAASGTF KQQDSGAVAK RRLDCYLYSF
LSDTDIFQTH EESLVAMNAW GFNVSPTWRK CTDIQEVMAY INEWETKRFD LPLGTDGIVI
KVNRYDQQRD LGYTAKSPRW AIAFKYKAMA ASTELNGIQY QVGRTGAVTP VALLTPVLLA
GTIVKRASLH NANEIERLGV MMHDTVFVEK GGEIIPKITG VDLNRRTDKS QPIVYPTTCP
ACGTALVRKE GEAHFYCPNE QGCPPQRQAR FEHFIQRRAM NIESLGEGKI ELLIDRGLVQ
TPADLYDLKA TDLLGIEKVF LVEETGKKRV VSFREKTVEN ILTAIERSKS QPFANVLFGL
GIRYVGNTTA EKLVDYFGSM DAIMNATQEQ LLAVPDTGPR IAESVVAWFG DTANQEFVER
LRAAGLQFVG EKKVVEQEGD SLTGKTFLYT GTFANFSREE LESRIEANGG KLLSGISKKL
NYLIVGENAG PSKVEKAKKL NVPMIGEDEF MAMLVV
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