| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2532 |
|---|
| Symbol | |
|---|
| ID | 8726276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 3053409 |
|---|
| End bp | 3054623 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | chalcone and stilbene synthase domain protein |
|---|
| Protein accession | YP_003387349 |
|---|
| Protein GI | 284037419 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.197428 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAT CCGGTAGTTT TATTAATGCC CTTGGGGTAG CCGTGCCCAT TCACGAGCAC
ACGCAACCCC AACTGGCCGA TTTTATGGCC AATGCCCTCG ACCTCGATGC TCCCGCCCGC
CGACAGATGA CCGCTCTTTA CCGACAAACG ACCATCCGCC GTCGTTACTC GGTATTGCCG
GATTACAGTC GGGAAAACGG GTCGTTCACT TTCTACCCGA ACACGCCAGA TCTGGAACCC
TTTCCGACGG TTGGGCAGCG GATGTCCGTC TACCAGCAGG AAGCACTTCC GCTGGCTCTT
CAGGCAGTTC GGGACTGTCT GGCCAGTTAT CCGGCGTTTT TCCCTTCGTC CATCACGCAT
ATTGTCGTTG TCAGCTGCAC CGGCTTTTAT GCGCCGGGGC TGGATATTGA CTTAGTCGAA
GCCCTGGGTT TACCGGGGAC TACCCAACGC CTACTGATCG GTTTCATGGG CTGCTACGGG
GCGTTCAACG GCCTCAAGGC AGCCGATGCT ATTGTACGAG CCAACCCGAA GGCCGCTGTG
CTGGTCGTTT GCGTCGAGTT GTGTACCATC CATTTTCAGA AGTCGAATAC CCCGTCAAAC
TGGCTGGCGA ATGCCCTGTT CGGCGATGGA GCGGCAGCGG TGCTGGTTCA GGGAAAGGCC
CGATTTGCGC AGTCATTTGC GTTACAATCC TTTCATTGCG ACTTACTACC GGCGGGTCGT
GACCAGATGG CCTGGACAAT TGGTGATCAT GGATTTGATA TGCTCCTGAG CGCGAAGATC
CCCGACCTCA TCCGGCACCC TATTGGGGTG ATGTTACGCC AGATGTTGGA TCAAAACGGC
TTGCATATAG GCGATATCGA TCAGTTCGCC ATCCATCCGG GTGGCCGACG CATTCTGGAC
CTGATCGAAG CCGAGTTAAC CCTTGATCGG AGTAAAACCA GGCACTCTTA TTCGGTACTG
GCTCAATACG GCAACATGTC GTCGGCAACG GTGATCTTCG TGCTGAAAGC TATCTGGGAC
GAACTGTCGG AGATGGCTGA TGCCGCGTCT GATTGTACAC CAACGCCCTT GCCAACCTGC
CTGGCGGGTT TTGCCTTCGG ACCGGGCCTG ACCATCGAAT CAATGTTGAT CCGGGCGCAG
GTTCATTCAC CGAAGCGGGT TCTACCCATA CGGGAACCGG CCTACAGGCA GCCCCTGGAC
GTAATCGACG CCTAA
|
|---|
| Protein sequence | MTPSGSFINA LGVAVPIHEH TQPQLADFMA NALDLDAPAR RQMTALYRQT TIRRRYSVLP
DYSRENGSFT FYPNTPDLEP FPTVGQRMSV YQQEALPLAL QAVRDCLASY PAFFPSSITH
IVVVSCTGFY APGLDIDLVE ALGLPGTTQR LLIGFMGCYG AFNGLKAADA IVRANPKAAV
LVVCVELCTI HFQKSNTPSN WLANALFGDG AAAVLVQGKA RFAQSFALQS FHCDLLPAGR
DQMAWTIGDH GFDMLLSAKI PDLIRHPIGV MLRQMLDQNG LHIGDIDQFA IHPGGRRILD
LIEAELTLDR SKTRHSYSVL AQYGNMSSAT VIFVLKAIWD ELSEMADAAS DCTPTPLPTC
LAGFAFGPGL TIESMLIRAQ VHSPKRVLPI REPAYRQPLD VIDA
|
|---|
| |