Gene Slin_2527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2527 
Symbol 
ID8726271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3048850 
End bp3049710 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387344 
Protein GI284037414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.41238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0176228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACG ACGCTGATTT TTATGTTGGC TGGCAGGACA AAGCCTCCCC TATTTTTGCC 
CGCCCCGTTG CCAAAGCGGC TATTGGCCTG ATCGTTCTGA CGCCCCTGCT GGCCCTACTC
CTGGTGGTGC AGCAACGGGG CTTTTCCGAT GCTGTGTTCG AGTATGGTCA GCTGACGACC
GTGGAGGGTC AACTCATTCG CAGCCCGGTT CCGTTCATAC GAGTGCCCGT TCGGGGAAGT
ACATCGGCCA CTCCCCTGTT TGAACGCATT CTTCTCATTG GTCTGGGCAA ACACGGGGCC
GATTCAACGC TCCATCAGTG GGAAATGGCG CATGGGTCGC TGACCGGTAA AACCCTGCGC
GTGCGGGGCA CCTTGCTTTA TCACGAAGGC CGGGCGGTTC TTGAACTTAC CGAAGGAGCC
AACGCATTGC TCACGGTGTC AACACCATCC GCTCCACCAG CCATGACCGC GTCCATACCT
TTGGGGAAGG TAACGCTGTC GGGCGAAATA ACGGACCCAA AATGTTTTCT GGGGGTGATG
AAACCCGGCG ACGGACGGCC GCACCGGTCC TGTGCAATCC GGTGTATTTC GGGGGGTGTC
CCGCCCCTCC TGTACGTGAA CGACGGGCAC AGCGGGCGCA ATGGGTATGT GGTTGTCGGG
GCGGATGGCG AACCGATTAA CAAACAGATA CTGGCCTATT TGGGCAACCG TGTGCAACTT
CGGGGCCATC TTGAGCAGGT TGATAACTGG CTGATGCTGT ACGTCGACGC ACCCGTTCAG
GTTGTAACCA CAAAAGTTGT CGACGATCCG TATCGCCCTT TTTTATCAAC CACAGGGCAG
CCTATTGCGC TGTGCCACTA A
 
Protein sequence
MKNDADFYVG WQDKASPIFA RPVAKAAIGL IVLTPLLALL LVVQQRGFSD AVFEYGQLTT 
VEGQLIRSPV PFIRVPVRGS TSATPLFERI LLIGLGKHGA DSTLHQWEMA HGSLTGKTLR
VRGTLLYHEG RAVLELTEGA NALLTVSTPS APPAMTASIP LGKVTLSGEI TDPKCFLGVM
KPGDGRPHRS CAIRCISGGV PPLLYVNDGH SGRNGYVVVG ADGEPINKQI LAYLGNRVQL
RGHLEQVDNW LMLYVDAPVQ VVTTKVVDDP YRPFLSTTGQ PIALCH