| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2522 |
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| Symbol | |
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| ID | 8726266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 3044295 |
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| End bp | 3046253 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_003387339 |
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| Protein GI | 284037409 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0950686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.047351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTACG AATCGCTGGA ATCAAAAGAG TGGCTGGTCA CTAACGGCCT GGGCGGCTAT
GCGTCCTCGT CGGTGGCGGG GGCCAATACG CGTCGGTATC ATGGCCTGCT GGTAGCGGCC
CACAATCCAC CCACCGACCG CCAGGTGCTG GTGTCGAAAG TTGAGGAAAC TATCGTTGAT
GAGAACGATA CATTCGAATT GTCGAGCAAC CGGTATGGCA CCGACCCGGT GCGCCGGAGC
GACGGCCCGG ATGTTATCCA CCCTAACGGT TGGCAGTACG TAGCTTCCTT CGACCGGCTG
CCTCTACCGC GCTGGGTGTA TCAGGCCGGA CGACATACGC TGATCAAAAC GGTGTTCATG
GTTCAGAATG CCAATACCAC GGTGATCGCC TATCAGAACT CCGGGGCGGC CCCGTTCACG
ATACGGCTGA ATCCACTCCT GGTTTACCGG GATTATCACA GTTTGTTTCA CCAGAATCAG
CAGTCTAATT TTCACATCGA ACCGGGGGAT CATTGGTACA GGATCTATGC GCAGTATGGG
GCCGAGCCGG TCCACATGGC GTTTTCGGCA GGCCAACTGA TCGAAAACCG GACGTGGTAC
AACCGCTTTA CATACTATCA GGAACAGCAG CGCGGCCTCG ATTATCAGGA AGATGCCTAC
TCCATCGGGA CAATTCATTA CCAGTTAGCT GCGGGCGAAA CGCTTTTCCT GACCTTTTCG
GGCGACCCAC AAACCGATCA ACCAACCCCC GACCTGTGGC TCACTCAGGA AGTCGGGCGG
GTTCATGCGT TGCGGGGTAC TCAGACCGAT ACGTTTTTAC AGGATTTGGT CGTGTCGGCC
AACCAGTTCA TTGTACAGCG TAAATCTACC GGCAGCGAAA CGATCATTGC GGGCTACCAC
TGGTTCACCG ACTGGGGGCG CGACACTATG ATTGCTTTGC GAGGCCTATG TATCTCCCTC
GGTCAGCAGC AGACAGCGCA ACGTATTCTG GGTACTTTTT TTCGGTACCT GGACGATGGT
ATGCTTCCCA ACCGGTTTCC CGACAACAGC CACGACCCTA TCGAGTACAA CACCATCGAC
GCGACCCTCT GGCTGTTTGT TGCGCTCTAT GAGTACCACC AGCGGTTCGA CGACCTGCCT
TTTATTGAGC AGCATTTCGA GCAACTCCTG ACCATTCTGG ATGCACACCG CGATGGCACC
CGGTATGGTA TTCACGTAAC CGAAGATGGG TTGTTGTATG GCGGAAAAGG TACGGCGCAG
CTAACCTGGA TGGATGCCCG CGTCGGCGAC TATGTGGTTA CCCCCCGGCA CGGCTGCCCG
GTCGAGATAA ACGCGCTGTG GTACAATGCC CTGCAAATCA CCGTTTACTT CGCCAAATTA
TTGGGCCGCA AACCGGATAT GTATGCCATG TTGCTCCGGC GATTCGAGTC CAGTTTCCGG
GCGAATTTCT GGAATACAAG CGGATATCTG AACGACGTCA TCATGCCGGG TGGAGCACCC
GACTGTAGCA TCCGGCCAAA TCAGGTTTAT GCGTTGAGCC TGCCCTTTCC ACTGCTTAAA
CTCGACGAGC AGAAACAGGT GCTGGCCGTC GTAACCGAAC ACCTTTACAC ACCCTATGGC
CTGCGAACGC TTTCGCCTAC AGACCCCGCT TTTGCCGCCG TGTACGGTGG TGATCAGTGG
CTGCGGGATA CGGCCTATCA CCAGGGAACC GTCTGGCCTT TTTTGCTGGG CGAGTACTGG
CCTGCGTATT TACGACTCAA TAAGTTTTCG GCAACAGCCC GCAAACGAAT GCATACCGAG
CTGGCGACCC TGAAAGAGCA TTTTTACGAA CACGATTGCC TGTTTGGCAT TTCTGAGATT
TTCGACGGGC TACACCCCAA AGAAGGTCGG GGAACGGCAA ATCAGGCCTG GTCGGTGGGG
GCGCTTATCA AACTACTGAC AGACTATCCA GCCCGATAA
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| Protein sequence | MAYESLESKE WLVTNGLGGY ASSSVAGANT RRYHGLLVAA HNPPTDRQVL VSKVEETIVD
ENDTFELSSN RYGTDPVRRS DGPDVIHPNG WQYVASFDRL PLPRWVYQAG RHTLIKTVFM
VQNANTTVIA YQNSGAAPFT IRLNPLLVYR DYHSLFHQNQ QSNFHIEPGD HWYRIYAQYG
AEPVHMAFSA GQLIENRTWY NRFTYYQEQQ RGLDYQEDAY SIGTIHYQLA AGETLFLTFS
GDPQTDQPTP DLWLTQEVGR VHALRGTQTD TFLQDLVVSA NQFIVQRKST GSETIIAGYH
WFTDWGRDTM IALRGLCISL GQQQTAQRIL GTFFRYLDDG MLPNRFPDNS HDPIEYNTID
ATLWLFVALY EYHQRFDDLP FIEQHFEQLL TILDAHRDGT RYGIHVTEDG LLYGGKGTAQ
LTWMDARVGD YVVTPRHGCP VEINALWYNA LQITVYFAKL LGRKPDMYAM LLRRFESSFR
ANFWNTSGYL NDVIMPGGAP DCSIRPNQVY ALSLPFPLLK LDEQKQVLAV VTEHLYTPYG
LRTLSPTDPA FAAVYGGDQW LRDTAYHQGT VWPFLLGEYW PAYLRLNKFS ATARKRMHTE
LATLKEHFYE HDCLFGISEI FDGLHPKEGR GTANQAWSVG ALIKLLTDYP AR
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