Gene Slin_2518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2518 
Symbol 
ID8726262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3038361 
End bp3038837 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content56% 
IMG OID 
Productprotein of unknown function DUF336 
Protein accessionYP_003387335 
Protein GI284037405 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.752864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0269404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA CCCACGTTTA CGTTCCTGTT CTAGTCTGGC TGGTGGCCAT CACGACGGCC 
AGTGCCCAGG TAAAAACAAC CTACACCCTT ACGCAGGAAA GCTGCAAAAA AATTGCGGCC
ATTTCCATAA AATACGCCGT CGACCAGGGC GCACCCGGTG GTAGTATCGC CATTGTCGAT
GCGGGGGGTC ATTTACTCTA CCTCGAACGG ATGGACAATA CCTTCGCCCA GGCCGCCGAG
GTGTCGTATG AGAAGGCCCG CACGGCAGCA CTGTTCAAGA AAGACACCAA AGGGTTTGAA
GACAACATCA ACGGCGGTCG CGTGGCCCTA ACGACGGTGG GGCCGGTCAT GCTACAGGGT
GGTATTCCGA TTGTGTATAA GGGCGATGTG ATTGGGGCCA TTGGCGTCAG CGGAACGAAA
AGTGCCGACC AGGACACCGA GGTAGCTAAA GCGGGGGCGG GAGTCAACCT GAACTGA
 
Protein sequence
MKFTHVYVPV LVWLVAITTA SAQVKTTYTL TQESCKKIAA ISIKYAVDQG APGGSIAIVD 
AGGHLLYLER MDNTFAQAAE VSYEKARTAA LFKKDTKGFE DNINGGRVAL TTVGPVMLQG
GIPIVYKGDV IGAIGVSGTK SADQDTEVAK AGAGVNLN