Gene Slin_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2517 
Symbol 
ID8726261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3037666 
End bp3038211 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content52% 
IMG OID 
ProductYHS domain protein 
Protein accessionYP_003387334 
Protein GI284037404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.483229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0264071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGA AACACATTGG CCTGCTTGTA CTAACCCTGT TGCTGACTGC ACCGGTCATG 
GCGCAGTTTC CCGTCCGAAA AGACGGCAAG TACCTACAAA ATCTCGATGC GAACGGCTGT
GCGCTACAGG GCTACGACTG TGTGGCGATG ATGACCATGC CCGACTCGAC CATTAAAGGG
AAAGCCGACT TTGCCTCGGA TTATGAAGGG GCCAAATACT GGTTTGCCTC CGCCAATAAT
AAAGCTCTCT TCGATGCCAA TCCAGCCAAG TATGCCCCGT TGTATGGCGG GTTCTGTGCC
ATCGCCGTGG CCGAGGGAAA CCTGCGCCCC ATTCAGGTCT GGACGCACCA GATCATTGAC
GGTCATCTGA CGGTGAATCA CAACGCTAAA GCCCTCAAAA TCTGGCTGAA AAACCCAACG
AAGAATCTAC AGGTAGCCCA GAAAAAATGG CCCACGGTGA GTCAGAAACC TGCCCAGTAC
GACATTCTTC ATAATGGCGA AACGCAGGAA TCGCTGGCAC AAACCTCTTT TGAAGGACCT
AAGTAG
 
Protein sequence
MSTKHIGLLV LTLLLTAPVM AQFPVRKDGK YLQNLDANGC ALQGYDCVAM MTMPDSTIKG 
KADFASDYEG AKYWFASANN KALFDANPAK YAPLYGGFCA IAVAEGNLRP IQVWTHQIID
GHLTVNHNAK ALKIWLKNPT KNLQVAQKKW PTVSQKPAQY DILHNGETQE SLAQTSFEGP
K