| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_2508 |
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| Symbol | |
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| ID | 8726252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 3028124 |
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| End bp | 3030478 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003387325 |
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| Protein GI | 284037395 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.033945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCAA CCAGTAGTAT TTCTGAAAAT ATCCTCCGCT TATCGCACTC AACCGTTGAG
AATGCCCTTG AGCCCATCGT TCTGTTTGAC CGGCACGGTC GCGTAAGTCG GGCCAATCAG
GCAGCCAGTC ATCAGCTTGG GTATTCCTCG CCCGACATGC TCAATGCCCG ATTTTCTGAT
TTTCATCCCG AGTATACGCC AGATTTGTAC GACCGGCTCT GGGCTGATCT ACAGCAATAC
CAGACCCTCA CCGTCGACAT GCGGCAGATT CGGAAGGATG GGGCCAACCG GCAGGTGGAG
GTGGGCATGA ACTTCGTCCA GTTCGAGGGG CAGGAGTTCC TTTGCTGTTT CATGCGAGAC
GTAACCGAGC GAAGCCAGCT GGACGATACC CTTCGCCGAA TATCGGAGGG GACGGCGGCA
GAAACGGGTA TTGATTTTTT TCAATCGCTG GTTCGTCACT TGACTGTTGC GCTGAATATT
CGTTACGCCA TGGTTACCGA GTGCAGCAAT GTGGAAAAAA CGCGGGTTCG TACGCTGGCT
TTCGGCGAAA ACGAGTCTCT GCTGGAAAAT GTCGAATACG ATCTGGCCGG TACGCCCTGC
GATATCGTCA TGCGTGACCG GGAGTTTTAC TACCCAACGG GGGTAGCTGA AAATTTCAGT
AAAGCCAGCG TTGATTCCTA TCTGGGCGTT CCTATCCATG ATAAGGCGGG TGAAGTGATT
GGTCACTTGT CCATCAGCGA TCCTCGACCC ATGATCGACC ATCGTAAATA TGTGGGAATT
CTGCGGGTAC TGGCGGCCCG CTGCGGGGCT GAAATTGGCC GTAAAGTGGC CGAAGAAAAA
CTCCTTCAGG CGCAGGAGCA ACTCGAAGCC ACCGTGCTTA CCCGCACCCT GCAACTGGCC
CGCGCCAAAG AGGAAGCGGA ACTGGCCAAT CGAGCCAAAA GTGAGTTTCT GGCCAATATG
AGCCACGAAC TTCGGACGCC CCTTAACGGA ATTCTGGGCT ATACGCAACT CTTCAAACGG
GATGAAGCCC TGAGTCCGAA TCAACTGAAA GGCGTCGATA TTATCCATAA CTGTGCTGAA
AATCTGCTGG TACTGATCAA CGATGTGCTC GATCTGGCCA AGATCGAAGC GCAGAAACTG
GACGTACAAA CGGCACCGTT TCACCTGACC GCCCTGTTTC AGGACTTAAT CCACCTCATT
GGGGTGCGGG CTGAACAGAA AGGGTTGCGG TTCTTGGCCG ATCTGGCTCC CGACCTGCCC
GCCTGGGTGA TGGGCGACGA GCGGAAACTT CGGCAGGTAC TGCTCAATTT GCTGGGCAAT
GCCGTCAAGT TTACCGAAAC GGGTGGCGTC ACGCTGCGCG TAGAACGGGC ATCGACTAAA
GCCCAACCCT ACCGGCTTCG CTTTGTGGTG GAAGATACGG GCATTGGTAT CGCCAGCGAC
CACCTGGCCG GTATTTTCAA ACCCTTTCAA CAGGTGCGCG AAACGGGGCA GTTTATCGAA
GGCACCGGGC TTGGGCTGAG CATCACCGAT CAATTGGTTC AGTTACTCGG GGGCGATCTG
CGGGTGTCGA GTGCCATTGA TGAGGGAACC CAGTTTCGGC TCCTGCTCGA CCTGCCTGAC
TGTCCGGCTT CAACTGTTCC TGGTTTGACG GCTGAGGCCG ATACGCACCG GCAGACGCCC
GTTGGCTACG AAGGCCCGCG CCTAACCGTG CTGGTGGTGG ACGATGGCTG GGAAAACCGG
TCGGTGCTCA ATAACCTGCT GATACCCCTG GGCTTTACCG TGCTGGAAGC TACCAACGGA
CAGGAAGCTA TCGATATGGC CGCTGCCGCC AAACCCGATC TGATCCTGCT CGATCTGGTA
ATGCCGCACG TTGATGGATA CGAAGCCATT CGGCAGATAC GGCCCGACAA AGACAAGGCG
GTGAAATCCG GCATTTATCC GGTTATTCTG GCCCTGTCGG CGCGGGTTTT TGCCGAAGAT
CGACAACACA CCAGGGAAGC GGGCTTCGAC GATTTTGTGA CAAAACCCAT TGAGTTATCC
CAACTTCTCG ATACCATCGC GAAGCACATG AACCTCCGCT GGGTGTATCG GACCACCGAA
GAGGAAGCTA CGGTACAAAC GACGTTCACG ACGGAAGCGA ACGACACGGT TCCTGCCGAC
TTGCCGCCCC GTGCGCAACT GGAAGCCCTG TTGAAACTGG CCCGTATGGG CGATATTCAG
GGCATTACCG CTGAACTGAT GCTGGTCGAA AACGCCAGCC CGGCTTACCG GGAGTTTGTG
CAGACCATCC GCCAGACAGT GGCTGAATTT GATACCCGAA AATTAAAACA GTATTTGCAG
GCCTGCCTGT CTTAA
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| Protein sequence | MTPTSSISEN ILRLSHSTVE NALEPIVLFD RHGRVSRANQ AASHQLGYSS PDMLNARFSD
FHPEYTPDLY DRLWADLQQY QTLTVDMRQI RKDGANRQVE VGMNFVQFEG QEFLCCFMRD
VTERSQLDDT LRRISEGTAA ETGIDFFQSL VRHLTVALNI RYAMVTECSN VEKTRVRTLA
FGENESLLEN VEYDLAGTPC DIVMRDREFY YPTGVAENFS KASVDSYLGV PIHDKAGEVI
GHLSISDPRP MIDHRKYVGI LRVLAARCGA EIGRKVAEEK LLQAQEQLEA TVLTRTLQLA
RAKEEAELAN RAKSEFLANM SHELRTPLNG ILGYTQLFKR DEALSPNQLK GVDIIHNCAE
NLLVLINDVL DLAKIEAQKL DVQTAPFHLT ALFQDLIHLI GVRAEQKGLR FLADLAPDLP
AWVMGDERKL RQVLLNLLGN AVKFTETGGV TLRVERASTK AQPYRLRFVV EDTGIGIASD
HLAGIFKPFQ QVRETGQFIE GTGLGLSITD QLVQLLGGDL RVSSAIDEGT QFRLLLDLPD
CPASTVPGLT AEADTHRQTP VGYEGPRLTV LVVDDGWENR SVLNNLLIPL GFTVLEATNG
QEAIDMAAAA KPDLILLDLV MPHVDGYEAI RQIRPDKDKA VKSGIYPVIL ALSARVFAED
RQHTREAGFD DFVTKPIELS QLLDTIAKHM NLRWVYRTTE EEATVQTTFT TEANDTVPAD
LPPRAQLEAL LKLARMGDIQ GITAELMLVE NASPAYREFV QTIRQTVAEF DTRKLKQYLQ
ACLS
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