Gene Slin_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2497 
Symbol 
ID8726241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp3018819 
End bp3019556 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003387315 
Protein GI284037385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.102141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.160252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATGT GTACTGCCAC TTATCTTCCG ATCAGCCCCG CTGGCTTTGT CCTGACCCAC 
AGCCGCGACG AAAAAACCAG TCGCCCGAGA GCGCTGCCTC CGACAACGCT GCGGATCGGT
GGTCAGCCCG TTACCTTTCC TAAAGACCCG CAGGGTATGG GTACTTGGAT TGCCCAATCC
AAAGGGCTTA CGGCCTGTTT GCTCAACGGG GCTTTTGTGG CGCATCAACC CAAACCGCCC
TACAAACATA GCCGGGGACT TATTGTGCTG GACGTATTTG ATTACGTATC CATCGACTCC
TTCATCAAAC ACTATGCTTT CACGGGCCTC GAACCGTTCA CGCTGATACT GGCCGAAACG
GACCGGCTGG TGGAGGTGCG CTGGAATGGC AAACGGGTGT TCATCACCGA AAAAGATCCG
GCCGCCCCAC ATATCTGGTC ATCGGCAACG CTGTATACTG CCGATATGAT GCGGGAGCGC
GAAAGCTGGT TCACGCAGTG GCAACACCAA ACGAAACACT GGTCGGTTGA GGCAATCCGG
CATTTTCACA AAACGGCCGG AGACGGAAAC CCACACACGG CACTACGAAT GAACCGCCAG
CATCAGTATG CGACCGTCAG TCTGACTACA GCCTTGCATA CCGCTACCCA AACCGAACTG
GTTTACGAAG ATCTTACCCT GCCAACCCAA TTGGCACCCA TTCATCTACT TACTACATAC
CGGTATGCAG TCGCTTAA
 
Protein sequence
MRMCTATYLP ISPAGFVLTH SRDEKTSRPR ALPPTTLRIG GQPVTFPKDP QGMGTWIAQS 
KGLTACLLNG AFVAHQPKPP YKHSRGLIVL DVFDYVSIDS FIKHYAFTGL EPFTLILAET
DRLVEVRWNG KRVFITEKDP AAPHIWSSAT LYTADMMRER ESWFTQWQHQ TKHWSVEAIR
HFHKTAGDGN PHTALRMNRQ HQYATVSLTT ALHTATQTEL VYEDLTLPTQ LAPIHLLTTY
RYAVA